Gordonia amicalis: IHQ52_19890
Help
Entry
IHQ52_19890 CDS
T08222
Name
(GenBank) DEAD/DEAH box helicase
Organism
gami
Gordonia amicalis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
UKO91224
LinkDB
All DBs
Position
4322241..4325237
Genome browser
AA seq
998 aa
AA seq
DB search
MPSEPQLSGPIPPDSAPSPRSLAPLHVLWRPGVGMAVWIDGEPADLPEPLRDAVSGRRFR
SEIPIVDDGNRRRFVRAATLGLTSAVSLLDASRSVTVPGDVRWYRYLLDGVRAFVTAGAV
APSAEQVAGEWLLRWVAIPTPTWRSWHAVVLGSAPDALLHNGSHAALDDFLAELVDHECR
TTIARSIPRLGEPRPASPVVRALLPGTDAGPPCSPERLSAAAGSWSRWNAGVPRDDQSLI
FRLHEPEYDDLADSHWDDAWDDETFDLPTRDEVADASRWRLEVCRRSIDGQIEPVAPHRL
DAHELDELTTALAAAVREFPELDRADPDRGSLDFLLPTDVAAELFATGAAALGAAGIPVL
LPRTIAEVRPSLTLRALAPPGGGAPAAMVGLREIREFEWRLALGDSPDAITLTDADLDDL
SGQKGDLVRVRGVWVRAEGSALTRAAAFVATQRALAASAPPADFGELFGLVTGESDRLPV
PVTRVEGLSWLDDVAEGGAIRPEPVTPPADLEAILRPYQQRGLDWLAHLSNLGVGGVLAD
DMGLGKTLQVIALECHERSVVADDAETPGPTLVICPMSLVGNWSREFARFAPTLRVAIHH
GPSRASGATFTAIRDSVDAVITTFAIAGRDLELLSAHPWHRVVVDEAQHLKNVNTIAAKA
IRTIPADRRLALTGTPVENRLEDLRAVIDLVNPGLLGSASVFRARYAEPIERDRDPGALR
RLSAITRPFILRREKTDPAIAADLPEKADFAVRANLTVEQAALYRAVIDELMAALRDKQQ
RTLRRRNVLAALTRLKQVCNHPAHYLADGTDLVRDGEHRSGKVELLADIVSTVADEGDRA
LVFTQFAAFGEMLSGWLGEQFGTEIPLLHGGLGRTERDRLVADFQSDDGPPVMLATLKAG
GTGLNLTAANHVIHVDRWWNPAVEDQATDRAYRIGQNQKVSVHRFVCVGTIEERIDDMIA
KKRELSRLTVAAGENWVSDLADDELFELFRLRDEAVSE
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagaaccgcagctcagtgggccgattccaccggactccgccccgtcgccccgt
tccctcgcacccctccacgtcctgtggcggcccggtgtcggtatggccgtgtggatcgat
ggcgaaccggccgaccttcccgagccgcttcgcgacgccgtgtccggccgccggttccgc
agcgagatcccgatcgtcgacgacggcaaccggcgacgattcgtccgggcggcgacactc
ggtctgacctcggcggtgtccctgctcgatgcgtcgaggtcggtgacggtcccgggcgac
gtccggtggtaccgatacctcttggacggtgtgcgcgccttcgtcaccgccggtgccgtc
gccccgtcggccgagcaggtcgccggggaatggttgctccgctgggtcgccatcccgacg
ccgacgtggcgcagctggcacgccgtcgtgctcggtagcgcgccggatgcactgctgcac
aacggctcccacgccgcactcgacgatttcctcgccgagctcgtcgatcacgagtgccgc
accacgatcgcccgctcgatcccccggctcggtgaaccacgtccggcgtcaccggtcgtc
cgtgcactcctacccgggaccgacgccggtccgccctgctcccccgaacgactctcggcc
gccgccgggagctggtcccgatggaatgccggcgtgccacgggacgaccagtcactcatc
ttccggctccacgaacccgagtacgacgacctcgccgacagtcactgggacgatgcgtgg
gacgacgagacgttcgacctgccgacccgcgacgaggtcgccgacgcctcacgatggcgg
ctggaggtctgccgccgcagcatcgacggtcagatcgagccggtcgcaccccatcgtctg
gacgcccacgaactcgacgagctgaccacggcactggccgccgcggtacgggagttcccc
gaactcgatcgagccgacccggaccgcggctccctcgacttcctgttgcccaccgacgtc
gccgccgaactgttcgccaccggcgctgcagccctgggcgccgccgggattccggtgctg
cttccccgcaccatcgccgaggtccggccgagcctcacgctgcgtgcactggcgccgccc
ggcggcggcgcaccggcggcgatggtcggactccgcgagatccgcgaattcgaatggcga
ctggcactgggagattcgcccgacgccatcaccctgaccgatgcggatctcgacgacttg
tccggccagaagggtgatctggtgcgggtccgcggcgtgtgggtccgcgcggagggttcg
gctttgacgcgtgccgccgccttcgtcgcgacccagcgtgcgctcgccgcatccgcgcca
cctgccgacttcggcgaactgttcggactcgtgaccggcgagtcggacagacttccggtg
cccgtcacccgggtcgaaggactctcgtggctcgacgatgtcgccgagggcggtgccatc
cgacccgagcccgtcacgcctccagccgacctggaagcgatcctgcgtccctaccagcag
cgcggcctggactggttggcccacctgtcgaacctcggcgtcggaggtgtactcgccgac
gacatgggtctgggcaagaccctgcaggtgatcgcactcgagtgtcacgaacgcagcgtc
gtcgccgacgatgccgagacacccgggccgaccctcgtgatctgcccgatgtcattggtc
ggcaactggtctcgtgagttcgcgcgcttcgcgccgacccttcgggtggccatccatcac
ggtccttcacgggcatcgggtgccaccttcaccgccatccgcgactccgtcgacgcggtc
atcacgacgttcgcgatcgcaggccgcgacctcgaactgctctccgcacatccgtggcac
cgcgtcgtcgtcgacgaggcccagcacctcaagaacgtgaacaccattgccgccaaggcg
atacggacgatcccggccgaccgtcgcctcgcgctgaccggcactcccgtggagaaccga
ctcgaggatctgcgcgcggtgatcgacctggtgaaccccggcctcctggggtccgcctcg
gtgttccgggcccgttacgccgaacccatcgagcgggaccgcgaccccggcgccctccga
cgcctgtccgccatcacgcggccgttcatcctgcggcgcgagaaaaccgatccggccatc
gccgccgacctgccggagaaggcggatttcgcggtgcgcgccaacctcaccgtcgaacag
gccgcgctctaccgtgccgtcatcgacgaactcatggcggcactgcgcgacaaacaacag
cgaaccctgcgtcgtcgcaacgtgctcgccgccctcacccggctcaagcaggtgtgcaac
caccctgcgcactacctcgccgacggcaccgacctcgtccgcgacggcgaacaccgctcg
ggcaaggtcgaattgctggccgacatcgtctccaccgtcgccgacgagggcgaccgcgca
ctcgtcttcacccagttcgcggcattcggcgagatgctgtcgggctggctcggcgaacag
ttcggcaccgagatcccgctgctgcacggtggtctcggtcgcaccgaacgcgatcgtctg
gtcgccgacttccagtccgacgacggtcccccggtgatgcttgcgaccctcaaggccggc
ggcaccggcctcaacctgaccgctgccaaccacgtcatccacgtggaccgctggtggaat
cccgcggtcgaggatcaggccaccgaccgcgcgtaccgcatcggccagaaccagaaggtg
tcggtgcaccgcttcgtctgcgtcggcaccatcgaggaacggatcgacgacatgatcgcc
aagaagcgcgaactgtcccggctgaccgtcgcggccggcgagaactgggtgtccgacctc
gccgatgacgaactcttcgaactgttccggctccgcgatgaggcggtgagcgaatga
DBGET
integrated database retrieval system
