Gordonia amicalis: IHQ52_20045
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Entry
IHQ52_20045 CDS
T08222
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
gami
Gordonia amicalis
Pathway
gami00300
Lysine biosynthesis
gami01100
Metabolic pathways
gami01120
Microbial metabolism in diverse environments
gami01230
Biosynthesis of amino acids
Module
gami_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IHQ52_20045 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gami01002
]
IHQ52_20045 (dapE)
Enzymes [BR:
gami01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
IHQ52_20045 (dapE)
Peptidases and inhibitors [BR:
gami01002
]
Metallo peptidases
Family M20
IHQ52_20045 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UKO91253
LinkDB
All DBs
Position
complement(4357526..4358629)
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AA seq
367 aa
AA seq
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MCVSTALDLAADPVELTAALVDIESESRNETAIADAVEAALREQTTGFEILRHGNRVLAR
TDRGRAQRVILAGHLDTVPVAGNLPSRRETHPEEGDVLHGCGTVDMKSGDAVFLHLAATL
DEPAHDLTLIFYDCEEIAAEFNGLNDIERELPEWLAGDVAILGEPTAGLIEAGCQGTLRV
RLSTSGTRSHSARSWMGDNAIHKLGGVLTKLAAYEARRVDIEGCEYREGLSAVGLGGGVA
GNVIPDAAHVDVNFRFAPDRSVEQALDHVREVFATDLADGTVTLEVTDAAAGALPGLAHP
AAAALVEAAQGRFRAKYGWTDVSRFSALGIPAVNLGPGDPNLAHRVDERVPVEQIRMVTD
LLRSYLS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtgagcaccgcactcgacctcgccgccgatcccgtcgaactgaccgccgccctc
gtcgacatcgagagcgagtcacgcaacgagacggcgatcgccgatgcggtggaagcggca
ctgcgggaacagacgacgggcttcgagatccttcggcacggtaatcgtgtgctcgcccgg
accgatcgtggtcgcgcccagcgtgtcatcctcgccgggcacctcgacaccgtgccggtg
gccggcaatctgccgtcgcgtcgggagacgcatcccgaggagggtgacgtcctgcacggt
tgcggcaccgtcgacatgaagtcgggcgacgcggtgttcctgcacctcgccgcgacgctc
gacgaacccgcgcacgacctgacgctgatcttctacgactgcgaggagatcgctgccgag
ttcaacggcctcaacgacatcgaacgtgagctgcccgaatggctcgccggcgacgtcgcc
atcctcggcgaacccaccgccggtctgatcgaggcgggatgccaagggacgcttcgggtt
cgactgtccacctcgggtactcgatcgcattcggcccgctcgtggatgggtgacaacgcg
atccacaaactcgggggagtgttgacgaagctcgccgcatacgaggctcgtcgcgtcgac
atcgaggggtgcgaataccgcgagggactctcggcggtcgggctcggcggcggtgtcgcg
ggcaacgtgatccccgatgctgcgcacgtcgacgtgaacttccgcttcgcccccgatcgt
tccgtcgaacaagccctcgaccacgtgcgcgaggtcttcgcgaccgacctcgccgatggc
acggtcaccctcgaggtcaccgacgcggcggccggtgcactccccggcctggcgcacccg
gcggcggccgcgctggtcgaggccgctcaggggcgcttccgggccaagtacggctggacc
gacgtctcgaggttctccgcactcggcatcccggcggtgaacctcggacccggcgacccc
aacctcgcccaccgcgtcgacgaacgggttccggtcgagcagatccgcatggtcaccgac
ctgctgcgcagctatctgtcctga
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