Gordonia amicalis: IHQ52_20880
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Entry
IHQ52_20880 CDS
T08222
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gami
Gordonia amicalis
Pathway
gami03420
Nucleotide excision repair
gami03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IHQ52_20880
03430 Mismatch repair
IHQ52_20880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gami03400
]
IHQ52_20880
Enzymes [BR:
gami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IHQ52_20880
DNA repair and recombination proteins [BR:
gami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IHQ52_20880
MMR (mismatch excision repair)
Other MMR factors
IHQ52_20880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
UKO91397
LinkDB
All DBs
Position
complement(4520470..4522593)
Genome browser
AA seq
707 aa
AA seq
DB search
MRHPTSSANPDARSRDAGAVEGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLV
DTGQVNPGQVLAVTFTARAAGEMRTRLRSLGVGGSTGNVAAQTFHAAAMRQLRYFWPRAF
GDARWELLDNKFPLISRAARRAGLDTATDTLRDLSSEIEWAKATLISPENYVEAVGRLGR
ESPAPPQKVAAVYAHYEDSKVSPDGDRLLDFDDLLIYMTQILTIELGAADEFRSRYRCFV
VDEYQDVTPVQQGLLDAWLGERDDLTVVGDANQTIYTFTGASPNYLLDFSRRFPEATVVR
LERGYRSTPQVVDLANRVIGAARGRIAGTRLRLIGQRPPGPEPQFAEYADEPAAATSIAI
EIKHLIKSGVSPSEVAILYRVNAQSENYEQALTEAGIPYQVRGGEAFFARTEVRQAMRQI
ATVAGREVKPGVTTIDVVRAVLGELGLTDEEPSGAQARARWESLKALVQLTEDMVAENPD
LTLPQLSAELTTRSEARHPPTVQGVTLSSLHAAKGLEWDAVYLVGLTDGSLPISQAIKGS
WEDVEEERRLFYVGVTRAREHLHLSWALARNEGGRARRRSRFLTDLIPDDSPASKIAKER
APRKGPTCRVCGSRLMDSTATLLGRCAGCPSDLDEDLLVALKEWRRDRAHEKKVPAFVVF
SDKTLTAIAEQRPTDTAALVSISGIGAQKLDEYGEDLLELVKTAGQK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccacccgacctcttccgcgaaccccgatgcccgctcccgcgacgccggtgcggtc
gagggcctcgaccccgagcagtctgcggccgtcctcgcgccgcgcggaccggtgtgcgtg
ctcgccggtgcgggtacgggtaagacgcgcaccatcacgcgccgtatcgcgcatctcgtc
gacaccggtcaggtgaatcccggtcaggtcctcgcggtgacgttcaccgcccgcgcggcg
ggggagatgcggacccggttgcggagcctcggcgtcggcggctccaccggcaacgtcgcc
gcccagactttccacgccgccgcgatgcggcagctgcgatacttctggccgcgcgccttc
ggcgatgcccgatgggagctcctcgacaacaagttcccgctcatctcgcgcgccgcacgc
cgcgccggcctggacaccgcgaccgacaccctgcgcgacctgtcctcggagatcgagtgg
gccaaggccaccctgatctcgccggagaactacgtcgaggcggtcggtcgtctcggtcgc
gagtcaccggcacccccgcagaaggtcgccgcggtgtacgcgcactacgaggactccaag
gtctcgcccgacggcgaccgtctcctcgacttcgacgacctgctcatctacatgacccag
atcctgaccatcgaactcggtgcggccgacgaattccgttcgcgctaccggtgtttcgtc
gtcgacgagtatcaggacgtgacgccggtccagcagggcctgctcgacgcctggctcggc
gagcgcgacgatctgacggtggtcggtgacgccaaccagacgatctatacgttcaccggc
gcctcgccgaactacctgctggacttcagccgtcgcttcccggaggcgacggtcgtccga
ctggagcggggctaccggtccacaccccaggtcgtcgacctcgccaaccgcgtgatcggc
gccgcccgcggacgcatcgccggcacccggctccggctcatcggccagcgcccacccggc
ccggaaccgcagttcgccgagtacgccgacgaaccggccgcggccacgtcgatcgcgatc
gagatcaaacacctcatcaagtcgggtgtctcaccgtccgaggtcgcgatcctctaccgc
gtcaacgcccagtcggagaactacgagcaggcgctgaccgaggccgggatcccgtaccag
gtacgcggcggtgaggccttcttcgcccgcaccgaggtccggcaggcgatgcgtcagatc
gccacggttgccggccgcgaggtcaagcccggtgtcacgaccatcgacgtcgtgcgcgcg
gttctcggcgaactcggactcaccgacgaggagccgtcgggtgcccaggcgcgcgcccgc
tgggaatcgctgaaggcgctggtgcagctgaccgaggacatggtcgcggagaaccccgac
ctcacgctgccgcagttgtccgcggaactcaccacccggtccgaggcacgccacccaccg
accgtgcagggtgtcacgctgtcgtcgctgcacgcggcgaagggactcgagtgggacgcg
gtctacctggtggggctgaccgacggctcgttgccgatcagtcaggccatcaagggctcc
tgggaggacgtcgaagaggaacgtcgcctgttctacgtgggcgtgacccgtgcgcgcgaa
catctgcacctgtcgtgggcgctggcccgcaacgaggggggccgcgcacgccgccggtcg
cggttcctgaccgatctcatccccgacgattcgccggcctcgaagatcgccaaggaacgt
gccccccgcaagggaccgacctgccgtgtctgcggctcgcggctgatggattcgacggcg
accctgctcggccgctgtgccggatgcccgtccgacctcgatgaggacctcctggtcgct
ctcaaggagtggcgtcgcgatcgtgcgcacgagaagaaggtgcccgccttcgtcgtgttc
tccgacaagacgctcaccgcgatcgccgaacaacgccccaccgataccgctgcgctggtg
tcgatctcggggatcggcgcgcagaaactcgacgagtacggagaggatcttcttgagctc
gtcaaaaccgcaggtcaaaaatag
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