Gordonia amicalis: IHQ52_21490
Help
Entry
IHQ52_21490 CDS
T08222
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gami
Gordonia amicalis
Pathway
gami03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IHQ52_21490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gami03021
]
IHQ52_21490
03400 DNA repair and recombination proteins [BR:
gami03400
]
IHQ52_21490
Enzymes [BR:
gami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IHQ52_21490
Transcription machinery [BR:
gami03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IHQ52_21490
DNA repair and recombination proteins [BR:
gami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IHQ52_21490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UKO91507
LinkDB
All DBs
Position
complement(4649709..4650761)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLTEEVIAENRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAITSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSDEDEPVTMYVRKQGPGTVTGADIVPPAGVTVHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSISARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFSLPIEDLELTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHALGLSLKDSPASFDPSQVAGYDPATGTWSEDASFDADSGEDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcacagcgacccaccctcaccgaggaagtcatcgccgagaaccggtcgaag
ttcgtcatcgaaccgctcgagccgggcttcggttacaccctcggtaactcgctgcgtcgt
actctgctcagctcgatcccgggtgctgcgatcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgtccccggggtcaaggaagacgtcaccgacatcatcctgaacctc
aagggcctcgtggtctcctcggacgaggacgagccggtcaccatgtacgtgcgcaagcag
ggtccgggcaccgtcaccggcgccgacatcgtgcccccggccggtgtcaccgtgcacaac
cccgatctgcacatcgcaaccctgaacgacaagggcaagctcgagatcgagctcgtcgtc
gagcggggccgcggctacgtgccggccgtgcagaacaaggcgtcgggtgccgagatcggc
cgtatcccggtcgactcgatctactcgccggtgctcaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgatcggctcgtgctcgacgtggagaccaagaac
tcgatcagcgcgcgtgacgcgctggcgtcggcgggcaagaccctggtggagctcttcggg
ctcgcccgggagctcaacgtcgaggccgagggcatcgagatcgggccgtctccggcggag
gccgaccacatcgcgtcgttcagcctgccgatcgaggatctcgagctgaccgtccgttcg
tacaactgcctcaagcgcgagggtgttcacaccgtcggcgagctggttgcccggaccgag
tcggatctgctcgacatccgcaacttcggccagaagtcgatcgacgaggtcaaggtcaag
ctgcacgcgctcggcctgtccctcaaggacagcccggccagcttcgacccgtcgcaggtc
gccggttacgaccccgccaccggtacgtggtcggaagacgcgtcgttcgacgccgattcc
ggtgaggatttcgccgaaaccgaacagctctag
DBGET
integrated database retrieval system
