Gordonia amicalis: IHQ52_22220
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Entry
IHQ52_22220 CDS
T08222
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gami
Gordonia amicalis
Pathway
gami03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IHQ52_22220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gami03400
]
IHQ52_22220
Enzymes [BR:
gami01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IHQ52_22220
DNA repair and recombination proteins [BR:
gami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IHQ52_22220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UKO91638
LinkDB
All DBs
Position
complement(4845766..4846641)
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AA seq
291 aa
AA seq
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MRVATWNVNSVKQRIPRLLPWLDERRPDVVCLQETKLSDTAFHETLGADLAERGYEIAHA
GQGQWNGVALLSRVGLDDVRIGFDGMPGYPNPETLEARAVSAVCDGLRIYSLYVPNGRTP
DSDHYTYKLEWLAALARAVTDPSSTLLCGDMNIAPADADVFDPDAYVGHTHVTPPERAAL
AEFAALGLRDVVRDRWPDDRVFSYWDYRAGMFHKDLGMRIDLILAGESAAGRVEAAWIDR
KARKGSKPSDHAPVIVDLDEAPDGDIGPVVPPPSNPAKRGGSKVKLPQTPE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgcgacctggaacgtgaactcggtgaaacagcggattccgcgcctgctgccg
tggctcgacgaacggcgtcccgacgtcgtctgcctgcaggagaccaagctctccgatacc
gcattccacgagacgctcggcgccgatctcgccgaacgcggttatgagatcgcgcatgcg
gggcagggtcagtggaacggcgtcgccctgctctcgcgggtcgggctcgatgacgtgcga
atcggattcgacggcatgcccggctacccgaacccggagacgctcgaggcgcgggcggtc
tcggcggtgtgcgacggcctgcgcatctactcgctctacgtgcccaacggccgcaccccg
gactccgatcactacacgtacaagctcgagtggctggccgcgctcgcgcgcgcggtcaca
gacccgtcgtcgacgcttctctgcggcgacatgaacatcgctcccgccgacgccgacgtc
ttcgacccggacgcctacgtcgggcacacgcacgtcaccccgccggaacgggcggcactc
gccgagttcgcggctctgggtctgcgggacgtcgtccgtgaccgctggccggacgaccgg
gtcttcagttactgggactaccgtgccggaatgttccacaaggacctgggcatgcggatc
gacctgatcctggccggcgagtccgccgccggccgggtcgaggcggcctggatcgaccgc
aaggcgcgcaagggcagcaaacccagcgatcatgcgccggtcatcgtcgacctcgacgag
gcccccgacggggacatcggcccggtggtcccgcccccgtcgaatccggccaagcgcggt
ggctcgaaggtgaaactcccccagacgccggagtga
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