Gallibacterium anatis: UMN179_00052
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Entry
UMN179_00052 CDS
T01482
Name
(GenBank) exonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gan
Gallibacterium anatis
Pathway
gan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UMN179_00052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gan03400
]
UMN179_00052
Enzymes [BR:
gan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
UMN179_00052
DNA repair and recombination proteins [BR:
gan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UMN179_00052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
SLFN-g3_helicase
AAA_22
UvrD-helicase
PhoH
AAA_16
UvrD_C
AAA_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEC16089
UniProt:
F4HA57
LinkDB
All DBs
Position
complement(58378..60339)
Genome browser
AA seq
653 aa
AA seq
DB search
MLALLQQLRDQKLIENIDYYFADYIARQGQSQTEAINDLAALFAALLSFANQQGHSCLFL
TKNVLENPFELKYQPEQQALLQQIEDLLAPYDVKALLANLVQHPAFSMNDQQNTPIVCKK
IGEIDALYFHRIWQDEHYIAARLSESRPIHYQQNELTDLKQILQALFPHSQHLPDWQKIA
VATAFSSTISFISGGPGTGKTTTVAKLLLGLQWLQQIRKQPWLNIRLAAPTGKAATRLTE
SLHQAIQNIHLPLDLSSTLPQEAATIHRLLGMRPNSLPRYHQQQPLNIDVLVIDEASMIN
LALMATLLRGIKPSTKLIFLGDKDQLASVESGAIMAELGQFLSFDYSRQQAAFLATVCEQ
QLAFSNELNFIRDSLCHLQHSYRFNQNTGIGQLAKAVNQRQAEESWQLFAEYNDIRVLPL
FRQGEASNQQVVDFAVQLYSDYFQFVQSENNWQPAEIAKAFMLFKQARLLSALRNGQFGV
EQLNQRIAEQLRRKKYIRFQHTHEWYLGKPVIILQNDNNSRLFNGDIGLVLPDKNGDLKV
WFEAEQGFREVLSSRVPSVEPAYVMTVHKSQGSEFTRTVLVLPAEYNPLLSKELIYTAIT
RAKQTFTVFSREAIWKAAVRTQTQRYSGLAQQIKQIFKEKESEDVIKGNSGIE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgttggcattattacaacaattacgcgatcaaaaattgattgaaaatattgattactat
tttgccgattacatcgcacggcaagggcagtcgcaaacagaagcgattaacgatctggca
gcattgtttgccgcattattgagttttgccaatcagcaaggacatagctgcctgtttttg
acaaaaaacgtattagaaaatccgttcgagttgaaatatcagccggaacagcaggcatta
ttgcaacaaattgaggatctgcttgcgccttatgatgtgaaagcattattggcaaattta
gtacaacatccggcattttcgatgaatgatcaacaaaatacaccgattgtgtgcaaaaaa
ataggtgaaattgatgcactctattttcatcggatttggcaagatgaacattatattgcg
gcgcgcctaagtgaaagtcgcccaattcattatcagcagaatgagctgacggatttgaaa
caaattttgcaagcattattcccacattctcagcacttaccggattggcagaaaatagcg
gtagcgacggcattttcatcaacaatcagctttatttccggtggaccgggtacagggaaa
acgacaacagttgctaaattattgcttggcttgcaatggttgcaacagatacgcaagcaa
ccttggctcaatattcgattagccgcaccgaccggaaaagcagcgacacgattgacggaa
tcattgcatcaagccattcaaaatattcatttgccacttgatttatcatcaacgttgcca
caggaagccgcaaccattcaccgtttattggggatgcgtcccaacagcctgccacgttat
catcagcaacagccgctcaatattgatgtgttggtgattgatgaagcctcaatgattaat
ttagcgttgatggcaacactgttgcgtggcataaaaccgagtacgaaattgatcttttta
ggtgataaagatcaattggcttcggtggaaagtggcgcaattatggcggaattggggcaa
tttttatcgtttgattacagccggcaacaagcggcttttttagcaacagtttgtgaacag
cagcttgcatttagtaatgaactgaattttattcgtgatagcctttgtcatctgcaacac
agctatcgttttaatcaaaataccggaattgggcagttggcaaaagcggttaatcaacgt
caagctgaagaaagctggcaactttttgctgaatataacgatattcgtgtgctgccgtta
tttcgacaaggtgaagcaagcaatcaacaggtggtggattttgcagttcaactttattcc
gattattttcaatttgtacaaagtgaaaataattggcagccggcagagattgcaaaggcg
tttatgttatttaaacaagcacgtttgttaagtgcattgcgtaacgggcaattcggtgtg
gagcagttaaatcaacgcattgcagaacagttacggcgtaagaaatatatccgttttcaa
cacacacacgaatggtatctcggcaagccggtgattattttacaaaatgataacaacagc
cgcttgtttaatggtgatataggtttagtattacctgataaaaacggtgatttaaaagtt
tggtttgaggcagaacaaggttttcgtgaagtgttatcaagccgtgtgccgagtgttgaa
ccggcttatgtgatgactgtgcataaatcgcaaggttctgaatttacccgcaccgtgctg
gtattgccggcggagtataatccactgttgagcaaagagcttatctatactgccattacc
cgtgcaaaacagacgtttacggtatttagtcgggaagcgatttggaaagcggcagtgcga
acacaaacccagcgttacagcggtttggcacaacaaatcaaacagatttttaaggaaaag
gagtcagaggatgttattaaaggcaattccggcattgagtga
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