Gallibacterium anatis: UMN179_00145
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Entry
UMN179_00145 CDS
T01482
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
gan
Gallibacterium anatis
Pathway
gan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UMN179_00145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gan03400
]
UMN179_00145
Enzymes [BR:
gan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
UMN179_00145
DNA repair and recombination proteins [BR:
gan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
UMN179_00145
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UMN179_00145
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UMN179_00145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
ECT2_BRCT0
Motif
Other DBs
NCBI-ProteinID:
AEC16182
UniProt:
F4HAM0
LinkDB
All DBs
Position
161731..163146
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AA seq
471 aa
AA seq
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MNDFSFFIYDYESFGVDPARDRPAQFAGIRTDKDFNIIGEPIVLYCKQTNDYLPHPAAVA
LTGITPQLCNQQGISEPEFAAKILEEFSQPNTCIMGYNNIRFDDEMTRYTFYRNFIDPYA
YSYSQGNSRWDLLDVIRATYALRPEGINWVYDDEGMPSFRLELLTKANNIEHSHAHDAMS
DVYATIEMAKLIKQQQPKLFDYFFTHRSKKEIEELIDYVNMTPLVHVSGMLGNYRSNISW
MVPLAPHPTNKNAVIFCDLAADIDDLLTLSVEELKQNLYTKKAELELQGKKSVPLKLVHC
NKCPILAPAKTLRPQDAERVGIDRQQCLTNLAKLQAMPEIREKVHQIFLEEYDNDYDDVE
TALYKVFFSYSDKNNLAILRTLSPEQLANHGLTFQDKRIPELLFRYRARHFYKTLSRAEQ
IKWQKYCHAKLDASSAEFIAEFEMLSAQYANDENKLLLLQNLYEYSLKLSD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttttccttttttatttatgactatgaaagtttcggcgtagaccctgccaga
gatcgaccggcgcaatttgccggcattcgcaccgataaagatttcaatattatcggcgaa
ccgattgttttatattgcaaacagaccaacgattatcttccgcacccggcggcagtagca
ctcaccggcattacaccgcagctctgtaatcaacaaggcattagtgaacctgaattcgcc
gctaaaattttagaagagtttagccagccgaatacttgcattatggggtacaacaatatt
cgtttcgatgatgaaatgacgcgttacactttttaccgtaatttcattgatccttatgca
tatagttatagtcaaggcaattctcgttgggatttgctggacgttattcgtgccacctat
gcgcttcgccctgaaggcattaattgggtctatgacgatgaagggatgccgagtttccgc
ttggaattattaaccaaagccaacaatatagaacatagtcacgcccacgatgcaatgtcg
gatgtctacgccaccatcgaaatggcaaaactgattaagcagcaacaaccaaaactgttt
gattacttttttacccatagatcaaaaaaggaaatcgaggaactcatcgattatgtcaat
atgacgcctttagttcacgtttccggaatgttgggcaattatcgtagtaatatcagctgg
atggtgccattggctccacacccgaccaataaaaatgcggtgattttttgtgatttggca
gcggatattgatgatctgcttaccttgagcgttgaagaattaaagcagaatctttatacc
aaaaaagcagagttggaattacaaggcaaaaaatcagtgccattaaaattagtgcattgc
aataaatgtccaatcttagcgccggcaaaaacattgcgtccgcaagatgctgaacgggta
ggtatcgatcgacaacaatgtttaactaatctggctaaactgcaagcaatgccggaaatc
cgcgaaaaagttcatcaaatctttttagaagagtacgacaatgattatgatgatgtggaa
accgcactgtacaaagtttttttctcatattcagataaaaataatttggctattttacgc
acattatcgccggaacagttggcaaatcacggtttaacctttcaagataaacgcattcct
gagttgttattccgttatcgcgccagacatttctataaaaccttatctcgtgccgaacag
atcaaatggcaaaaatattgtcacgctaaattggatgcaagcagtgccgaatttattgct
gaatttgaaatgctttctgcacaatatgccaatgatgaaaacaaattgctgttattgcaa
aatttatatgaatatagcctaaaactatcggattga
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