Gallibacterium anatis: UMN179_00246
Help
Entry
UMN179_00246 CDS
T01482
Name
(GenBank) L,D-transpeptidase catalytic domain protein
KO
K21470
L,D-transpeptidase YcbB
Organism
gan
Gallibacterium anatis
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gan01002
]
UMN179_00246
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gan01011
]
UMN179_00246
Peptidases and inhibitors [BR:
gan01002
]
Cysteine peptidases
Family C82
UMN179_00246
Peptidoglycan biosynthesis and degradation proteins [BR:
gan01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
UMN179_00246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
DUF6858
Motif
Other DBs
NCBI-ProteinID:
AEC16283
UniProt:
F4HB51
LinkDB
All DBs
Position
complement(246861..248270)
Genome browser
AA seq
469 aa
AA seq
DB search
MLLKKHVLTAMFLSSLMITSSFAEENGTENKNNQEESTVAVVTEDQTQAQLLKLKEVMKD
VQLVFPEKLAEIYAARDFSPIWQDENAKNQFLQDYALLGLTNVSNDVKAQLERLSHVEKN
SLAADILVSDSWLNYLNYVSNVRSNAQNWLYDSYRYRAQLPSDEVINAWLDAVSQQQLAA
FVAKFDQVNHRYAQTKKAILSELTKSTADSNVLAKLAINLQRLRFIPDFETGIFVNIPTF
QLHYYRNGEEILSSRVIVGKKARKTPVMMSKLSNIVVNPPWNAPVRLINEDLIPKVRKDP
SYIYRNGYTIIDSKGNTIDPYTIDWENMTAKRFPYRLRQAPGGDSALGNFKFNMPSKDAI
YLHDTPNHRLFNNKNRAISSGCIRVNKSDELATLLLTEAGWSVDKKAQVLKSRKTTSVPI
QSTNPVYLYYVTAWADAQGKVHTVADIYGYDQKLSLSEENKSLLQQYLL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaaaaaacacgttttaaccgcaatgtttctctcatcattgatgattacctcg
tcgtttgcggaagagaacgggacggagaataagaataatcaggaagagagtacggttgca
gtggtaactgaagatcaaacacaggcacagcttttgaagttaaaagaggtgatgaaggat
gttcaattggtatttccggaaaagctagctgaaatttatgcggctagagatttttctcct
atttggcaagatgaaaatgcgaaaaatcaatttttgcaagattatgcgttattaggcttg
accaatgtttccaatgatgtaaaagcacaattggaaaggctttcgcacgtagagaaaaat
agtttggctgctgatattttagtgagtgatagctggttgaattatttaaattatgtttcc
aatgtgcgttcaaatgcacaaaattggctttatgacagttatcgttatcgtgcacagttg
ccaagtgatgaggtaattaatgcgtggttggatgcggtatcacaacaacagttggcagcc
tttgtcgctaaatttgatcaagtcaatcatcgttatgcacaaaccaaaaaagcgattttg
tccgaattaacaaaatcaacagcggatagcaacgtattagcgaaattggctattaattta
cagcgtttgcgttttattccggattttgaaaccggaatttttgtgaatattccaactttt
caactacattattatcgtaacggcgaggaaattttaagttcacgtgttattgttggtaaa
aaagcgagaaaaacgccggtaatgatgagtaaactgagcaatattgtggtcaatccaccg
tggaatgcgccggtgcgcttaattaatgaagatttaattccgaaggttcgcaaagacccg
agttatatttatcgtaacggttataccatcattgacagcaaaggcaatactatcgaccct
tacactatcgattgggaaaatatgacggcaaaacgcttcccatatcgtttgcgtcaggcg
ccgggtggtgatagtgcattaggtaattttaaatttaatatgccgagtaaagatgccatt
tatctgcacgacacacctaatcatcgtctgtttaataataaaaaccgcgcgatcagttcc
ggatgtattcgtgtcaataaatcggatgaattagcgactttattgttaacggaagcaggt
tggagtgttgataaaaaagcacaagtgctaaaaagccgtaaaacgacttcggtgccgatt
cagtctactaatccggtctatctttactatgtaacagcgtgggcggatgctcaaggtaag
gttcatactgttgctgatatttatggttatgatcaaaaattatcgttaagtgaagaaaat
aaatcgttattgcaacaatatttgctttga
DBGET
integrated database retrieval system
