KEGG   Gallibacterium anatis: UMN179_00648
Entry
UMN179_00648      CDS       T01482                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gan  Gallibacterium anatis
Brite
KEGG Orthology (KO) [BR:gan00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gan02048]
    UMN179_00648
Enzymes [BR:gan01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     UMN179_00648
Prokaryotic defense system [BR:gan02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   UMN179_00648
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD DUF6267
Other DBs
NCBI-ProteinID: AEC16682
UniProt: F4HDE4
LinkDB
Position
688595..691756
AA seq 1053 aa
MHINESTIEHQAIEQLQSLGWQYAYGKEVLPNEAYPWRESRNEVVLKPLLLQSLQKINPH
LPEETLQEVVSSVCKSDISSVEERNRQFYQLLKQGVKVHYQQNGQEKNDVALLVDFKHPE
NNLFYVINQLEIQGIKGKRIPDILCFVNGLPLVIFELKNPLDVKADLERAFNQLQTYKKE
IEELFVFNQMMLISDGTAARVGSLTADLQRFSPWKVVDESNRSRRLIFEDELSGVLQGLF
SPQVLLDYLHDFIVFENDSKGRTIKKIAAYHQFYAVNAAVEASIRAVENNSRKIGVVWHT
QGSGKSLSMLFYAGKLISQPELKNPTIVVVTDRKDLDGQLFTTFSQDQDITQQPPIQADG
REALREELAKRESGGIIFTTIQKFGLREGEADHPVLNSRHNIIVISDEAHRSQYGFAQKI
NQGMYREGYAKYLRTALPNAGFIGFTGTPISLEDKDTQEVFGDYISIYDIYDAVEDGATV
PIIYEARQIPLTESSKYSLAMREAENLLDDDDEENFQFRLREQLMGTEQRLNRLAEDLVN
HFEIRNTLAEGKAMVVVMSRRICVKLYNEIIKLRPEWHSDDVHQGAIKIMMTGNAGDPPE
MQAHIYSSQDKKILEKRFKDAEDPLKIVIVRDMWLTGFDAPCCHTMYIDKPMQGHNLMQA
IARVNRVFRNKSKDNGGLIVDYVGLAEELKQATIQYTNSGGKDRVKTDIDQVFQKMLEYL
DIIKGQFATPVDGKVFPLGEALKINQQDALIKAILQAANHIVALDRVNQQADDSSDKTPR
KNAFLQAVRQAKKGLSLCGAMEKVQPYRQQLAFFDAVRATIIKQERQAPSSASPQERQLK
LTALLNQAVHSEEAIDLFALIGEKRPDISLLSEEFMQMVKDSDIKDLWLTAIEGYLKSEI
REKSANNLATQKRFEEKLKEAMNRYHNHNLTVIDIIKELLAMAKEFEQQLAKGQELGLSD
TELAFYEALIRNQSAVEVMGDQALIPLAKEITEQLRKSVTVDWQYKESVRAKMRRLIRRA
LSKYKYPPDLEKEAVEFVLQQAEVVAEQLSDNA
NT seq 3162 nt   +upstreamnt  +downstreamnt
atgcacatcaacgaatccacaatagaacatcaagcgattgaacaattgcaatcgcttggt
tggcaatatgcttacggcaaggaggtgctgcctaatgaagcttacccttggcgtgaaagt
cgcaatgaagtggtgttaaagccgctgttattacaaagtttgcaaaaaattaatccacat
ttgccggaagaaacgttgcaagaggtggtgagctcggtgtgcaaaagcgatatttcgtcc
gtggaagaacgtaatagacagttttaccagctgttaaagcaaggggtgaaagtccattat
cagcaaaacggacaggaaaaaaatgatgtggcgttattggtggattttaaacatccggaa
aataatctgttttatgtgattaatcagttggaaattcaaggcataaagggcaagcgaatt
cctgatattttgtgttttgtgaacggtttgccgttggtgatttttgagttaaaaaacccg
cttgatgttaaggcggatttggagcgtgcctttaatcagttgcaaacttataaaaaagaa
attgaagagctgtttgtatttaatcagatgatgctgatttcagacggcaccgcggcacga
gtcggttcattaaccgccgatttgcaacgtttttccccttggaaagtggtggatgaaagc
aatcgcagccggcgtttaatctttgaggatgagctttccggcgtgttgcaaggcttgttt
tcgccgcaggtgctgctggattatctgcacgattttattgtgtttgagaatgacagcaaa
ggtcgcaccattaaaaaaattgccgcctatcatcaattttatgcagtcaatgcggcggtg
gaagccagcattcgcgcggtggaaaataatagccgcaaaatcggtgtggtttggcacacg
caaggttcgggcaaatcgctctcaatgctgttttatgccggcaaactgatcagccaaccc
gagctgaaaaatccgaccattgtggtggtgaccgaccgtaaggatcttgatggacagttg
ttcaccaccttcagccaagatcaggatattacgcaacagcctcccattcaggcagatgga
cgtgaagcattgcgtgaagagctggcaaaacgggaaagcggcggcattatttttaccacg
attcaaaaattcggtttacgtgagggcgaagcggatcatccggtgttgaacagtcgtcat
aatattattgtcatcagcgatgaagcgcaccgttcgcaatatggctttgcacagaaaatt
aatcagggaatgtatcgcgagggctacgctaaatatttacgtactgcgttgccgaatgcc
ggttttatcggttttaccggcacgccaatcagtttggaagacaaagatacacaagaggtt
ttcggcgactatatttcgatttatgacatttatgatgcggtcgaagatggtgcgactgtg
ccgattatttatgaggctcggcaaattccattgacagagagcagtaaatattcattggca
atgcgtgaagcggaaaatttacttgatgatgacgatgaggagaatttccaattccggttg
cgtgaacagttaatgggcacggaacagcgtttaaatcgtttggcagaagatctggtcaat
cactttgaaattcgtaatacccttgccgaaggtaaagcgatggtggtggtgatgagccgc
cgcatttgcgtgaaactttataatgaaatcattaagttacgccctgaatggcatagcgat
gatgtccatcaaggcgcaatcaaaattatgatgaccggcaatgccggcgatccacctgaa
atgcaagcacatatttattcttctcaagataaaaagatcttggaaaagcggtttaaagat
gcggaagatccgctaaaaatcgtgattgtacgtgatatgtggctaaccggtttcgatgca
ccttgttgtcatacgatgtatatcgataagccgatgcaagggcataatttgatgcaggcg
attgcaagggttaatcgtgttttccgcaataaaagcaaggataacggcggtttgattgtc
gattatgtcggcttggcggaagagttgaaacaggcaacgattcaatacacaaactccggc
ggtaaagatcgggtgaaaaccgatattgatcaggtattccaaaaaatgttggaatatttg
gacatcattaaagggcaatttgccacaccggtagacggaaaagtctttccgctcggcgaa
gcgttaaaaatcaatcaacaggatgcgttaataaaagccattcttcaggctgccaatcat
attgtggcattagatcgtgttaatcagcaagctgatgacagcagcgataaaacaccaaga
aaaaatgcttttttacaggcagtgcgtcaagcgaagaaagggttgtcgttatgtggtgca
atggaaaaagtgcagccttatcggcaacagttagcattttttgatgccgtgcgtgcaacc
attattaaacaggaacgccaagccccatcatctgcttcaccgcaagaacggcaacttaaa
ttaaccgcactattaaatcaggcggtacattcggaagaggcgattgatctgttcgcttta
atcggtgaaaaacgccctgatatttcgttgttgtcggaagagtttatgcagatggtgaaa
gatagcgacattaaagatttgtggctaaccgcaattgagggctatcttaaatcagaaatt
cgtgagaaatcagccaataatttggcaacacaaaaacgctttgaagagaaattaaaagag
gcgatgaatcgctatcacaatcataatttaactgtgatagatattattaaagagttgttg
gcaatggcaaaagagtttgaacaacagctcgccaaagggcaagaattggggttaagcgac
actgagttggcattttatgaagccttaattcgtaatcagagtgcggttgaagtgatgggt
gatcaggcgttgattccgttagcgaaagagattactgagcaattacgtaaatcagttact
gttgattggcaatataaggagtccgttcgtgccaaaatgcgcagattaatcagacgcgcc
ttatcaaaatataaatacccacctgatctggaaaaagaagcggttgaatttgtattacaa
caggcagaagtggttgcggaacaattaagtgataatgcttaa

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