Gallibacterium anatis: UMN179_00903
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Entry
UMN179_00903 CDS
T01482
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
gan
Gallibacterium anatis
Pathway
gan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
UMN179_00903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gan03021
]
UMN179_00903
Transcription machinery [BR:
gan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UMN179_00903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AEC16931
UniProt:
F4HF11
LinkDB
All DBs
Position
970994..972868
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AA seq
624 aa
AA seq
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MDQNPQSQLKQLIAQGKEQGYLTYAEVNDSLPEDLVDADQIEDIIQMINDMGIQVLESAP
DADDLMLNENVTDEDAVEEATQVLSSVESEIGRTTDPVRMYMREMGSVELLTREGEIDIA
KRIEEGINEVQCAVAEYPQALDHLLAQYDLVEKGEVRLSDLITGFVDPNAVDTEDYSKFM
SDDSGEGEDDDNISSDDLDESDDDEDSDSESNNSADNDSDNSIDPEMAREKFSALKEQHH
KTVAAIDKYGRGNKKAKDQINALSEIFQQFRLVPKQFDILVLSMRDMMKRIRTQERQIQR
LAVEYAKMPKGTFQKAFIGHETNDAWIEKALAAGKNWSEKLKDYEDGIRQAIALLKVIEQ
ESGLTITQIRQIGEKISQGELKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGN
IGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQ
MLQEMGREASPEELAERMGMPEDKIRKVLKIAKEPISMETPIGDDDDSHLGDFIEDNTLE
LPLDSATAQSLKVATHEVLEGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQ
IEAKALRKLRHPSRSETLRSFLDE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaatccacaatctcagttaaaacaattaattgcacagggcaaagaacaaggt
tatctcacctatgccgaggttaatgatagtttaccggaagacctcgttgatgccgatcaa
atagaagacatcattcaaatgatcaacgatatggggattcaagtgcttgaatcagccccg
gatgccgatgatcttatgttgaacgaaaatgttaccgatgaagatgcggtagaggaagca
acacaagtgctttccagcgtggaatctgaaattggtagaaccaccgacccggtgcgtatg
tatatgcgtgaaatgggaagcgtagaattgctaacccgagaaggcgaaattgatattgcg
aaacgcattgaggaaggaattaacgaagttcaatgtgcagttgcggaatatccacaagct
ctggatcatttattagcgcaatatgatcttgttgaaaaaggtgaagttcgtctttccgat
cttattaccggttttgtcgatccaaatgcagtagataccgaagattactcaaaatttatg
agtgatgattccggagaaggagaagacgatgacaatatttccagcgatgatctcgatgaa
agcgatgatgacgaagacagtgatagcgaatccaacaacagtgccgacaatgattccgat
aacagcatcgatcctgaaatggcacgtgaaaaattttctgcattaaaagagcaacatcat
aaaactgtcgctgcgattgataaatacggtcgaggcaataaaaaagcaaaagatcaaatt
aatgcactttcggaaattttccaacaattccgtttggtaccgaaacaattcgatattttg
gtgttatcaatgcgggatatgatgaaacgtattcgtacccaagagcgccaaatccaacgt
ttagcggttgaatatgccaaaatgccgaaaggtactttccaaaaagcctttatcggacac
gaaacaaatgatgcttggattgaaaaagcattagctgccggcaaaaactggtcggaaaaa
ttaaaggattacgaagacggtatccgtcaagcaattgcattattgaaagtaattgaacag
gaaagcggtttaaccattacacaaatccgccaaatcggtgaaaaaatttcgcaaggtgaa
cttaaagctcgtcgcgcgaagaaagagatggtagaagccaacttgcgtttggtgatttcc
attgccaaaaaatataccaaccgtggattacagttccttgatctgattcaggaaggtaat
atcggtttgatgaaagcggtagataaatttgaataccgccgcggttataaattctccacc
tatgcaacttggtggattcgtcaggcaattacacgttcaatagcggatcaggctcgtact
atccgtattccggtacatatgatcgaaacgattaataaattaaatcgaatttctcgtcaa
atgttgcaggaaatggggcgtgaagcctctccggaagagttggctgaacgaatgggaatg
ccggaagataaaatccgcaaagtgttgaaaatcgctaaagagccgatttcaatggaaact
ccgatcggcgatgacgatgattcacatttaggtgattttattgaagacaataccttggaa
ttaccattggattccgcaactgctcaaagtctgaaagtggcaacccacgaagttttggaa
ggtttaacaccacgtgaagcgaaagtgcttagaatgcgtttcggtattgatatgaatacg
gatcacactttggaagaagtgggtaaacaatttgatgttactcgtgaacgtattcgtcag
attgaagccaaagccttgcgtaaattgcgccatcctagtcgttccgaaaccttgcgcagt
ttcttagacgaataa
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