Gallibacterium anatis: UMN179_00909
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Entry
UMN179_00909 CDS
T01482
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gan
Gallibacterium anatis
Pathway
gan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UMN179_00909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gan03400
]
UMN179_00909
Enzymes [BR:
gan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
UMN179_00909
DNA repair and recombination proteins [BR:
gan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UMN179_00909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AEC16937
UniProt:
F4HF17
LinkDB
All DBs
Position
complement(979513..982827)
Genome browser
AA seq
1104 aa
AA seq
DB search
MFTVYYANQLENQKHLLVRLLEVQPLQDPFAENVILVQSPGMAQWLQLQLAEHFSIAANF
AFPMPSSFIWKLYKQNIAEISEQNPFNKSAMVWRLMRIIPTLLHLPAFSRLNDYLGSAPE
QNKLFYLAEKIADLFDQYLVYRPEWINQWQTADWQQMTTSFVQQLSPRFKPIADNIMNDI
SWQVLLWQALVADIQQHYPEQQIWHRANLYQTFLEQLQQGYCPKNLPTRIIVFGISAMPP
MFLSILSALSQYIDIHLFFNSPSRYYWGDLIDHRYLEKLKQKIQTESKEMQTPYDETLAV
GNPLLASWGKLGRDFLYQLTQLEPNDIEVYNAPEGGQLLQQLQRQILELTPTASAILQYQ
EGDNSITLHVCHSPMREVEVLRDNLLAMFEQDPTLTPKDIVVMVADIDRYTPYIQAVFSQ
YQEEDKRYIPFSISDRKVTESDVLIATFLQLFTLKESRFSSDIVLSILDVPAIRQCFEID
LGELQTIRDWVTQSGIRFGLDKYDQEPVPNYNAWQNGVERMLLGYALKSESGIWQDAIGF
DYSEGLQGKLAGKLAHFFHALQQWQQKASQNLMAEEWRIAILQLIDTLFNVGEQPIVIAL
LKQTVHQVIDIINEADYPQTIDTEIIGELLQQKLNEQDNSLHFLLGKLNFCTLLPMRAIP
FKVICLLGMNDVDFPRQLPNNSFDLMQYQTQKGDRSRREDDCYLFLEALLSARQKLYISY
VGYSIVDNTEYEPSVLVNQLWDYMADHLSHPDDLKQLRFSYPMTVFSEHNFLAPHFSYAQ
EWLPIAQAQQQQQHPLREFDQTLLQPENGSHQLIVELDDLQQFVIAPIKYFFEQRLGVYL
NENEQERVESEVFELTALAQYQLKQRLFENEPQNSTLEFEKAQREGMLPRAEFAFLQQEE
LEQSCDLLRQATAQYQQQAADSVMVDVTFELDGQEVRLQGQIDHNYQQQYVDWRIGKIRD
QDVLKLWLNHLILSAMGQVTDSRFIGINKGNIETTTFSAIDQNKAMAQVAIYLQDFLQAQ
GQICILPTTDFQQYQKLFAEENSGEAQLYRQLMEQQSSNEFDKSQPYWQRLLVQTKNLDY
AAIKQRFTDWFAQMLEQLEDNATS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccgtctattacgccaatcagcttgaaaatcaaaaacatctgttagttcgatta
ttggaagtgcaacccttacaggatccatttgccgaaaatgtgattttggtgcaaagcccc
ggaatggcgcaatggttacaacttcagttagcagaacatttttctatcgcagcgaatttt
gcttttccaatgccgtcatcatttatttggaaactgtataaacagaatattgcagagatc
agcgaacaaaacccatttaataaatcggctatggtttggcgtttaatgcgaattattccg
acattattgcatttaccggcgttttcgcgcttgaatgattatttaggcagcgcgcctgag
caaaacaaattgttttatttagcggaaaaaattgccgatctttttgaccaatatttggtt
tatcgtccggagtggatcaatcaatggcaaacagcagattggcaacagatgacgacaagt
tttgttcagcaattatcgcctcgctttaagcctattgcggataatattatgaatgatatc
agttggcaggtgctgttatggcaggcattggtggcggatattcaacaacattatcccgaa
cagcagatatggcatcgcgctaatttgtatcaaacctttttggagcaattacagcaagga
tattgcccgaaaaatttaccaacgcgtattatcgtgtttggcatttccgcaatgccgcca
atgtttttgtctattttgtctgcattgagccaatatattgatattcatctcttttttaat
agtccaagccgttattattggggagatttaatcgatcatcgctatttagaaaaattaaag
caaaaaattcaaacagagagcaaagagatgcaaacaccttatgatgaaactttagcggtg
gggaatccgttattagcatcgtggggcaaattagggcgagattttctttaccaattaaca
cagttggaaccaaacgatattgaggtgtataacgcgcctgaaggtggtcaactgttgcaa
cagctacaacgacaaattttggagttaacgccgacggcatcggcaatattgcagtatcaa
gagggcgataattcaataacactgcacgtgtgccatagcccaatgcgtgaagtggaagtg
ctacgtgataatctgctggcaatgtttgagcaagatccgacattgacaccaaaagatatt
gtggtgatggtggcggacattgatcgctatacaccttatattcaggcggttttttcgcaa
tatcaagaagaggataaacgttatatcccgttttctatttcggatagaaaggtgacggaa
agtgatgtgttgatagcaactttcttacaactgtttacactaaaagaatcacgtttttcc
agtgatattgtgctttcgatattggacgtgccggcaattcgtcaatgttttgagatagat
ttgggtgaattgcaaacgattcgagattgggtaacgcaatccggcattcgtttcggttta
gacaagtatgatcaggagccggtaccgaattataatgcttggcaaaacggagttgagcgg
atgttattgggctatgcgttgaagagtgagtccggcatttggcaagatgctatcggtttc
gattatagtgaaggattacaagggaaattagccggtaaattggcacatttctttcacgca
ttacaacagtggcaacaaaaagcgagccaaaatttaatggcagaagagtggagaatagcg
attctgcaattaatagatacgttatttaatgtcggtgaacagccgatagtgattgcattg
ttgaagcaaactgttcatcaagtgattgatattattaatgaagcagattatccacaaact
attgacacagaaattattggtgaattattacaacaaaaactcaatgaacaggataacagt
ctgcatttccttttaggcaaactgaatttttgtactttattaccaatgcgcgcgatcccg
tttaaggtgatttgcttgttgggaatgaatgatgttgattttccacgacaattaccaaat
aacagttttgatttgatgcagtatcaaacccaaaaaggggatcgttcacggcgagaagat
gactgttatctctttttggaagcgctattatccgcacgacaaaaactttatatcagttat
gttggctattcgatagtggataacacagaatatgaaccttcagtgttggtgaaccagtta
tgggattatatggcggatcatttatcacatccggatgatctcaagcagctacgattcagc
tatccaatgactgtgttcagtgagcataattttttagcaccgcacttttcctatgcacaa
gagtggttgccgattgcgcaagcgcagcagcaacaacagcatccattaagagaatttgat
caaacattattgcaaccagagaatggcagtcatcagctcatagttgagcttgatgatctg
caacaatttgttattgcgccgattaaatatttctttgaacagcgtttaggcgtttatctc
aatgaaaatgaacaggaacgtgttgaaagtgaagtgtttgaattgacagcgctggcgcaa
tatcaactgaaacaacgtctatttgaaaacgaaccgcaaaatagcacattagaatttgaa
aaagcgcaacgagagggaatgttgccacgagcagaatttgcttttttacaacaagaggaa
ttagaacagagttgtgatctattgcggcaagcaacggcgcagtatcaacagcaagcagcg
gattccgtgatggtggatgtaacgtttgagcttgatgggcaagaggtgagactgcaaggt
cagattgaccataattaccaacagcagtatgtcgattggcgcattggtaaaattcgtgat
caggatgttctcaaattatggctgaatcatctgattttatcagcgatggggcaggtaaca
gacagtcgatttattggcataaataaaggcaatatagagacaacgactttttctgctatc
gatcaaaacaaggcaatggcacaagttgcgatttatttacaggatttcttgcaggcacaa
gggcaaatctgtattttgccgacaacagacttccagcaatatcaaaagttgtttgcagag
gaaaacagtggagaagcacagttatatcgccaattaatggaacagcagagcagcaatgag
tttgataaatctcaaccatattggcaacggttattagttcagactaaaaatttggattat
gcagccattaagcaacgttttactgattggtttgcacaaatgttggaacaacttgaagat
aatgcaacatcatag
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integrated database retrieval system
