Gallibacterium anatis: UMN179_01133
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Entry
UMN179_01133 CDS
T01482
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gan
Gallibacterium anatis
Pathway
gan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UMN179_01133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gan03021
]
UMN179_01133
03400 DNA repair and recombination proteins [BR:
gan03400
]
UMN179_01133
Enzymes [BR:
gan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UMN179_01133
Transcription machinery [BR:
gan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UMN179_01133
DNA repair and recombination proteins [BR:
gan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UMN179_01133
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AEC17158
LinkDB
All DBs
Position
complement(1242671..1243654)
Genome browser
AA seq
327 aa
AA seq
DB search
MQGSVTEFLKPHLVDIEQISPTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVFLTLTKSGIGPVVAADITHDGD
VEIVNPDHIICHLTDENASINMRIRVQRGRGYIPASSRTHDEERPIGRLLVDACYSPVDR
IAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRQPEV
KEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASRGLSLGMRLENWPPASIAED
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaagccacacttagttgatattgagcaaattagc
cctactcatgctaaagtgaccttggagccgttagagcgaggctttggccacacattgggt
aatgctttacgtcgcattcttttgtcatctatgcctggttgtgcagtgactgaagtagag
attgacggtgtattgcatgagtacagtagtaaagaaggtgttcaagaagatattcttgaa
gttcttttaaacttaaaaggtctagcggttaaagtgcagaataaagatgacgtatttctg
acactaacaaaatctggaattggccctgttgttgccgcggacatcactcatgatggtgat
gttgaaatcgttaatccagatcatatcatttgtcatttgacagatgaaaatgcctctatt
aatatgcgcattcgtgtacagcgtggaagaggatatattccagcatcttcacgcactcac
gatgaagaacgtcctatcggtcgtttgttggtagatgcatgttatagccctgtcgatcgt
attgcttataatgttgaagcagcacgtgttgaacagcgtactgacttagataagttagtt
attgagatggaaactaatggaacattagatccagaagaggcgattcgtcgtgcagcaact
attttagcagaacagcttgatgcattcgttgatttgcgtgatgttcgtcaaccagaagtc
aaagaagaaaaaccggaatttgatccgattctacttcgtccagtggatgacttagagttg
acagttcgttctgctaactgtttgaaagcagaaacaattcactatatcggtgatttagtt
caacgtacagaagttgaattacttaaaactcctaatcttggtaagaaatctcttactgaa
attaaggatgtattggcttcacgtgggctatcactaggtatgcgccttgagaattggcca
ccagcaagtattgctgaagactag
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