Gallibacterium anatis: UMN179_01357
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Entry
UMN179_01357 CDS
T01482
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
gan
Gallibacterium anatis
Pathway
gan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMN179_01357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gan03019
]
UMN179_01357
Enzymes [BR:
gan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UMN179_01357
Messenger RNA biogenesis [BR:
gan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UMN179_01357
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
CMS1
SNF2-rel_dom
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AEC17376
UniProt:
F4HAT0
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All DBs
Position
complement(1469049..1470248)
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AA seq
399 aa
AA seq
DB search
MEHQYLTSTKFSDFNLHPNILSALQKMGMTYCTPIQADSLPYSLAGKDIAGQAQTGTGKT
VAFLTALFQKLIQEPASHHTLAAIILAPTRELAVQIYHDAQHFAQTTGLKLGLAYGGDGY
DKQLQALQQGVNILIGTTGRVIDYMKQRIISLDHVQVVVLDEADRMFDLGFIRDIRYILR
HCPPPSERLTMLFSATLSFKVRELAFEDMNDPHYIEIESAYKTADTVKEELFYPSNQDKM
RLLLTLLEEEWPERCIIFANTKHQCEKIWQYLLADQLRAGLLTGDVPQKKRFALLEQFAN
GQLDILVATDVAARGLHIPQVTHVFNYDLPDDYEDYVHRIGRTGRAGENGISISFACEDY
AVNLPAIEQYIGHSIPVSHYDPSALLPLPKRRFPRKARS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcaatatttaacttcaaccaaatttagtgattttaatcttcatccgaacatt
ctctcggctttgcaaaaaatgggaatgacgtattgcacaccgattcaagcagattccttg
ccttactcattggcaggcaaagatatcgccggacaagcacaaacaggcacagggaaaacc
gttgcttttttaacagcactttttcagaaactcattcaagagccggcatctcatcacaca
ttggccgccattattctcgcaccgacacgtgaacttgccgtacaaatttatcacgatgcc
caacactttgcgcaaaccaccgggttaaaactgggtttagcgtacggcggcgatggttat
gacaaacagcttcaagctttgcaacaaggcgtgaatattcttatcggcaccacaggccgt
gtgattgactatatgaaacagcgcattatttcgctcgatcacgttcaagttgtggtgctt
gatgaagcggatagaatgtttgacctcggctttatccgcgatattcgctatattttgcgc
cattgcccacctccgagtgaacgtctaacaatgttattctctgccacgctctcctttaaa
gtacgcgaattggctttcgaagatatgaatgatccgcattacattgaaattgaatccgcc
tataaaactgcagatacggtcaaagaagagctgttttatccctctaatcaggacaaaatg
agattactgttgacccttttggaagaggaatggccggaacgttgcatcatttttgccaat
accaaacatcaatgtgaaaaaatttggcaatatttgctagccgatcaattaagggcgggc
ttactcaccggtgatgtgccacagaaaaaacgcttcgctttattggaacaatttgcgaat
gggcagttggatattctggttgcgaccgatgttgcggcaagaggattacacattccgcaa
gtcacacacgttttcaattatgatctgccggatgattatgaagattatgtgcatcgtatc
gggcgcaccggacgtgccggagaaaacggtatttccatcagttttgcctgcgaagactac
gccgttaatctgccggcgattgaacaatatatcggacattccattccggtcagtcattac
gatccttctgcactgttgccgctgccgaaacggagatttccacgcaaagcaagatcgtga
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