Gallibacterium anatis: UMN179_01358
Help
Entry
UMN179_01358 CDS
T01482
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gan
Gallibacterium anatis
Pathway
gan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMN179_01358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gan03021
]
UMN179_01358
03019 Messenger RNA biogenesis [BR:
gan03019
]
UMN179_01358
Transcription machinery [BR:
gan03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
UMN179_01358
Messenger RNA biogenesis [BR:
gan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UMN179_01358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA
S1CSD-TOTE-2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEC17377
UniProt:
F4HAT1
LinkDB
All DBs
Position
1470414..1471676
Genome browser
AA seq
420 aa
AA seq
DB search
MNLTELKNMPVSELVKLGEEQMGLENLARLRKQDIIFAILKQHSKSGEDIFGDGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDMIEGKIRPPKEGERYFALLKVNQV
NDDRPEISRNKILFENLTPLHANYRLRMERGNGSTEDLTARILDLAAPIGKGQRALIVAP
PKAGKTMFLQNIAQSITYNYPECILMVLLIDERPEEVTEMQRLVKGEVVASTFDEPAARH
VQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVTPASGKVLSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAID
FNSSGTRKEELLTTPDELQKMWILRKIVHPMGEIEAMEFLIDKLSMTKTNEEFFEAMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaacagaattaaaaaatatgcccgtttctgagctggttaaattaggcgaagaa
caaatggggctagaaaatttagcacgtctaagaaaacaggacatcatttttgccatttta
aaacagcattcaaaaagtggagaagatatcttcggagatggtgttttagaaattttgccg
gatggtttcggttttttacgctccgcagacagttcttatttggctggtccggatgatatt
tatgtttcgccgagtcagattcgccgttttaatttgcgcaccggtgatatgattgagggg
aaaatcagaccgccgaaagagggtgaacgctattttgccttattaaaagtgaatcaagtc
aatgacgaccgtcctgaaatttcccgcaataaaatcctatttgaaaatttaacgccgctt
cacgctaattatcgcttaagaatggaacgcggtaacggttcaaccgaagatttaaccgcg
cgtattcttgatttggctgcaccgattggtaaagggcaacgtgcattaattgttgcgcca
ccgaaagcggggaaaacaatgtttttgcaaaacattgcacaaagcatcacttataactat
ccggaatgtattttaatggttctgctgatcgatgaacgtccggaagaagtgacagaaatg
cagcgtttggtgaaaggtgaagtagtggcttccactttcgatgaaccggcggcacgccac
gtgcaagtagctgaaatggtgattgagaaagcaaaacgtttggttgagcataagaaagat
gtggtcattttgttagattccattacacgtttagcgcgcgcttacaacacagtcactccg
gcttcgggcaaagtgttgtctggcggggtggatgcaaatgccttgcatcgccctaaacgt
ttctttggtgctgcgcgtaatgttgaagagggcggcagcttaactattatcgctactgca
ttggttgataccggctctaaaatggatgaagtgatttacgaggagttcaaaggaaccggt
aatatggagcttcacctttctcgtaagattgcagaaaaacgcgtcttcccggcgattgat
ttcaatagctcaggtacacgtaaagaagagttgcttaccacgccggatgagttacaaaaa
atgtggattttacgcaaaattgtgcatcctatgggtgaaattgaagcgatggaattctta
attgataaattatcaatgacgaaaaccaatgaagaattttttgaagcgatgaaacgctct
taa
DBGET
integrated database retrieval system
