Gallibacterium anatis: UMN179_01430
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Entry
UMN179_01430 CDS
T01482
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gan
Gallibacterium anatis
Pathway
gan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMN179_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gan03019
]
UMN179_01430
03016 Transfer RNA biogenesis [BR:
gan03016
]
UMN179_01430
Enzymes [BR:
gan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UMN179_01430
Messenger RNA biogenesis [BR:
gan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UMN179_01430
Transfer RNA biogenesis [BR:
gan03016
]
Prokaryotic type
tRNA degradation factors
UMN179_01430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
S1_RRP5
aRib
KH_SLS1_2
KH-I_KHDC4-BBP
NTNH_C
Motif
Other DBs
NCBI-ProteinID:
AEC17449
UniProt:
F4HB03
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All DBs
Position
1556308..1558464
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AA seq
718 aa
AA seq
DB search
MTPFVKQFKYGQHTVTLETGAMARQATAAVMASMDDTCVFVTVVAKKEVKEGQDFFPLTV
NYQERSYAAGRIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFLNEIQIIATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQFVLNPTMSEQKQSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVFGHQQQQVVIEAIKEFAAEAGKPRWDWQAPAKNEA
LINRIKELSEARLGEAYRITEKQARYEQIDVIKADVCATVLAENSEDESITEGKIIDIIH
ELESRVVRSRILAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQSLAVTTLGT
ERDAQIIDELTGERTDHFLFHYNFPPYSVGETGLIGSPKRREIGHGRLAKRGVAAVMPTL
EEFPYVVRVVSEITESNGSSSMASVCGASLSLMDAGVPIKAAVAGIAMGLVKEEDKFVVL
SDILGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITPEIMQIALNQAKSARMHILNVME
QAIQTPRADISDFAPRIHTMKIDPKKIKDVIGKGGAVIRSLTEETGTSIDIDDDGTVKIA
ATDNNAAKAVMSRIEDIVAEVEVNKIYQGKVTRIVDFGAFVVVLGNKEGLVHISQISDER
VEKVSDYLQVGQEVMVKVVEIDRQGRIRLTMKDLQPKAVNEPETTNENSVIEDHSIDA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtgactccatttgtgaaacaatttaaatacggacaacataccgtaacattagaaaccggt
gcaatggcgcgtcaagcgaccgcagcggtgatggcaagtatggatgatacttgcgtattc
gtgactgtagtggcgaaaaaagaggtaaaagaagggcaagacttcttcccattaaccgtt
aattatcaggaacgtagttatgccgccggtcgtattccgggcggtttctttaaacgtgaa
ggtcgtccttcagaaggggaaaccttaatcgcgcgcttgattgaccgtccgattcgtccg
ttattcccggaaggtttcttgaacgaaattcagattattgcgaccgtagtgtccgttaat
ccacaaattagcccggatttagtggcaatgatcggtgcgtctgcggctctttccttatcc
ggtgtgccgtttaatggcccaatcggtgcggcacgtgttggttttattaatgatcaattt
gtacttaacccgacaatgtccgaacaaaaacagagccgtttggatttggtggttgccggt
acggataaagcggtattaatggttgaatctgaagcggatattcttaccgaagaacagatg
ttggcggcggttgtttttggtcatcaacaacaacaagttgtaatcgaagctatcaaagag
tttgctgcagaagcgggtaaacctcgttgggattggcaagcgccggctaaaaacgaagct
ttaatcaaccgcatcaaagaactttccgaagcacgtttaggtgaggcttatcgtatcact
gaaaaacaggcacgttatgaacagattgatgtgattaaagcggatgtttgtgctaccgtt
ttagcggaaaacagcgaagatgaaagcattaccgaaggtaaaatcatcgatattatccac
gaattggaaagtcgtgttgtgcgcagccgtattttagccggtgagccgcgtattgatggt
cgtaccgttgataccgtgcgtgcattggatatttgcaccggcgtgttgcctcgtacccac
ggttccgctattttcactcgtggcgaaacacaatctttagcagttaccacattaggtaca
gaacgtgatgcacaaattattgatgagttaaccggtgaaagaacagatcatttcttgttc
cactacaatttcccgccatattctgtaggtgaaaccggtttaattggctcaccgaagcgt
cgtgaaatcggtcacggacgtttagcaaaacgtggtgtggcagcggtaatgccgacttta
gaagagttcccttatgtggtgcgtgttgtgtctgaaatcacagaatcaaacggctcttct
tcaatggcatctgtttgtggtgcgtctttgtcattgatggatgccggtgtgccgattaaa
gcggcggttgccggtattgcaatgggcttggtgaaagaagaggataaatttgttgtgttg
tctgatattctcggtgatgaggatcaccttggtgatatggacttcaaagttgccggtact
cgcacaggggtaactgcattacaaatggatattaagattgaaggaattacacctgaaatt
atgcagattgcacttaaccaagcaaaaagtgcaagaatgcacattcttaatgtaatggaa
caggcgattcaaacaccacgtgccgatatttctgattttgcacctcgtattcatacaatg
aagattgatccgaagaaaattaaagatgtgatcggaaaaggtggtgcggtaattcgtagt
ttgaccgaagaaaccggcacctcaatcgatattgatgatgatggtaccgtgaaaattgcc
gcaactgataacaatgcggcgaaagcagtaatgtccagaatcgaagacattgtcgctgaa
gtggaagtgaataaaatctaccaaggtaaagtgactcgtatcgttgattttggtgcattt
gttgtggtgttgggcaacaaagaagggttggttcatatatcacaaatttctgatgagcgt
gtagagaaagtcagtgattatctacaagttggtcaggaagtaatggtgaaagtagttgaa
atcgatcgtcaaggtcgtattcgtttgacaatgaaagatcttcaacctaaagcggtgaat
gaacctgaaacaacaaatgaaaacagcgtaattgaagatcattcaatagacgcgtaa
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