Gallibacterium anatis: UMN179_01432
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Entry
UMN179_01432 CDS
T01482
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gan
Gallibacterium anatis
Pathway
gan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMN179_01432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gan03019
]
UMN179_01432
03009 Ribosome biogenesis [BR:
gan03009
]
UMN179_01432
Enzymes [BR:
gan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UMN179_01432
Messenger RNA biogenesis [BR:
gan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UMN179_01432
Ribosome biogenesis [BR:
gan03009
]
Prokaryotic type
rRNA helicases
UMN179_01432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
AEC17451
UniProt:
F4HB84
LinkDB
All DBs
Position
1559523..1561295
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AA seq
590 aa
AA seq
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MTFADLGLPENLLSAISDLGFINPSPIQQACIPHLLNGEDVLGMAQTGSGKTAAFALPLL
SKIDLDKKYPQLLVMAPTRELAIQVADACEQFAKNLKGINIVTVYGGQRYDIQLRALKQG
AQVVVGTPGRILDHIRRKTLDLSALKAIVLDEADEMLRMGFIEDVETVMAELPESHQTAL
FSATMPEPIRRITRRFMREPQEIKIQSTQQTAPDITQSYWFVNGFKKSEALVRFLEVEEF
DAAIVFTRTKTGTTEVTDLLERNGFRCAALNGDMTQQLREQTLDKLRNGRLDIVVATDVA
ARGIDIDRISLVVNYDIPLDPESYVHRIGRTGRAGRAGRALLFVEAREKRLLRNIERLMK
KTVDEVQIPNHEQLQQVRRDKFRQRITAQLEHHDLDQYRSLLEDIFAADQSQEDIAAAMM
MLLQGKQKLILPPDPEIKPARRENRRDRADRERKENPRSAERRGVRNELPMDLYRIEVGR
ADGVEVGHIVGAIANEGNISSRYIGHIKLYDHYATVELPVEMPKPLLQHFQRTYVVGKPM
KMSLLEMAKNSDEGKHSPRKKGREGESFTKRSHSGKERKFKENRKKFARH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgcagatttaggtctgccggaaaatcttttatctgcaatttcagacctaggt
tttattaatccttcacctatccagcaagcgtgtattccgcatttattgaatggtgaagat
gtgttgggtatggcgcaaaccggtagtgggaaaacagccgcgtttgcattgccgttatta
agcaaaatcgatcttgataaaaaatatccgcaacttttagtgatggcaccgacacgagaa
ttggctatccaagtggcagatgcgtgcgaacaatttgcgaaaaatttaaaaggtatcaat
attgttaccgtttatggcggtcaacgttatgatattcaattacgcgcattaaaacagggt
gcgcaagtggttgtcggcacaccgggacgaattttggatcatattcgtcgtaaaacattg
gatttaagtgccttgaaagccattgtgcttgatgaagccgatgaaatgttacgaatgggc
tttattgaagacgttgaaaccgtgatggcggaattgccggaatcgcaccagacagcccta
ttttcagcaacaatgccggaaccgattcgccggatcacacgccgttttatgcgtgaaccg
caagagatcaaaattcaatctacacaacagactgcaccggatatcacacaatcttattgg
tttgtaaatggcttcaaaaaaagtgaagcattagtgcgtttccttgaagtggaagagttt
gatgctgcaattgtttttacgcgcactaaaaccggcaccaccgaagtgactgatctgctt
gaacgtaacggctttcgttgtgcggcactaaatggcgatatgacacaacagctgcgtgaa
caaacattggataaattaagaaacggtcgtttggatattgtggtggcaacggatgtggca
gcacgtggtattgatattgatcgcatcagtttagtggtgaattatgatattccgcttgat
cctgaatcttatgtgcatcgtattgggcgtaccggacgtgccggacgtgccggacgtgca
ctgttgtttgttgaagcgagagagaaacggttgttacgcaacattgaacgtttgatgaaa
aaaacggttgatgaggtgcagatcccgaatcacgagcagttacagcaagttagacgtgat
aaattccgtcagcggattacagcacagttggaacatcacgatctcgatcaatatcgcagt
ctattggaagatatatttgcggcggatcaatcacaggaagatattgctgcggcaatgatg
atgttattgcaaggtaagcagaaattaatcctgccgccagatccggaaattaaaccggca
cgtcgtgagaacagacgtgatcgtgctgatcgggaacgtaaagaaaatccacgttcggca
gagcgtcgtggggtaagaaatgaattgccgatggatctttatcgtattgaagtcggtcgt
gccgatggcgtagaagttgggcatattgttggtgcgattgcgaatgagggcaatatcagt
agtcgttatatcggtcatattaaattgtatgatcattatgcaacagtggagttgccggta
gaaatgccgaaacctttgttgcaacatttccaacgtacttatgttgttggcaaaccaatg
aaaatgtctttattggaaatggcgaaaaatagcgatgaaggcaaacattcgccacgtaaa
aaagggcgtgagggagaatcttttaccaagagatcgcattccggtaaagaacggaaattt
aaagaaaatcgcaaaaaatttgcgcgtcattaa
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