Gallibacterium anatis: UMN179_01438
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Entry
UMN179_01438 CDS
T01482
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gan
Gallibacterium anatis
Pathway
gan03030
DNA replication
gan03430
Mismatch repair
gan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UMN179_01438
03430 Mismatch repair
UMN179_01438
03440 Homologous recombination
UMN179_01438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gan03032
]
UMN179_01438
03400 DNA repair and recombination proteins [BR:
gan03400
]
UMN179_01438
Enzymes [BR:
gan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UMN179_01438
DNA replication proteins [BR:
gan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UMN179_01438
DNA repair and recombination proteins [BR:
gan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UMN179_01438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AEC17457
UniProt:
F4HB90
LinkDB
All DBs
Position
complement(1568025..1571558)
Genome browser
AA seq
1177 aa
AA seq
DB search
MQKGALIRTFSNVKQPLGKIMSAPKFVHLRVHSDFSMIDGLPKVKTLVDECAKQQMVAMA
LTDFTNFCGLVKFYGATLGKGVKPIVGADVLVNSEELADEPFSLTLLAKNNAGYQNITLL
LSRAYQRGYREYPMIDREWLIEHAEGIIILSGGKDGDVGKFLVRGNQNAAENCLAFYQRY
FPDHFYLAISRTGRNDEEHYLQLAVNLAEQHQIPLVATNDVMFLCEEDFEAHEIRVAIHD
GYTLDDPNRPKKYSPQQYFRSEQEMCELFADLPQALENSVYIAQRCNVTIRLGQYFLPQF
PTGDLSTEDYLIQQAKTGLEQRLAVLFPDEQERQQKRAKYDERLETELKVINQMGFPGYF
LIVMEFIQWSKDNNIPVGPGRGSGAGSLVAYSIRITDLDPLQFDLLFERFLNPERVSMPD
FDVDFCMDGRDRVIEHVAQMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRIAK
LIPPDPGMTLQKAFDAEPKLVEAYNSDEEVKELIDMGRKLEGITRNAGKHAGGVVISPSK
ITDFSPIYCDSEGKHPVTHFDKSDVEYAGLVKFDFLGLRTLTIIQWAVDMINERMRREGK
PEIDIHHIPLDDEKSFKLLLDAQTTAVFQLESRGMKDLIRRLKPDCFEDIIALVALFRPG
PLQSGMVDNFIRRKHGEEEISYPDAEYQHQSLKPILDPTYGIILYQEQVMQIAQVLAGYT
LGGADLLRRAMGKKKPEEMAKQRSVFKEGAIKNGVDGELAMKIFDLVEKFAGYGFNKSHS
AAYALVSYQTLWLKAHFPAEFMAAVMTSEMDKVEKIVNFYDESLRMGLKVVPPDINTGKY
GFSVNEKGEIVYGLGAIKGVGEAPVENIIEARTSGGLFRDLFDLCARVDLRKINRRTFDN
LIKAGALDKLGPHRAAIALNLEDALKASDQHAKDEALGQTDMFGVLASSPKQVEQAYANT
PKWTEKMVLDGEQETLGLYLSSHPISRYLKELSHYSNRLSEVSVTRRGESCTVSGLVVNF
RSLVTKRGNRLGILTLDDRSARMDITLFSDALDQFEEKIHKDHIVIVSGSVIPDDFTGGI
RMIAREINTLEEIRQRVVKSLAIAIKQEQLNNDFIDRFKQILTPYAQGTIPIHIYYDSPK
GRAMLTLGIEWRITPHDDLISDLTAFVGEEQVELEFN
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaggtgcgttaattcgcaccttttctaatgtgaaacagcctttaggaaaaatt
atgtcagcaccgaaatttgttcatttgcgcgttcatagcgacttctcaatgattgatggt
ttacccaaagtaaaaacattggtggatgagtgcgcaaagcaacagatggtggcaatggca
ttaaccgatttcaccaacttctgtggtttggtgaagttttatggtgccactttaggcaaa
ggtgtcaagccaattgtcggtgcagatgttttagtcaatagcgaagagcttgcggacgag
ccgttcagtttaacgctgctcgccaaaaataacgctggctatcaaaatatcactttgctg
ctttcccgtgcctatcaacgtggttatcgtgaatacccgatgatcgaccgcgaatggctg
attgaacacgccgaaggcatcattattctttctggcggtaaagacggcgatgtcggcaag
tttctcgtcagaggcaatcaaaatgccgccgaaaactgtttagccttttatcaacgctat
tttccagatcatttttatcttgctatcagccgcacaggtcgtaacgatgaagagcattat
ctacaactggcagtcaacttagccgaacagcaccaaattccgctggtggcgaccaatgac
gtaatgtttctttgcgaagaggattttgaggctcacgaaatccgtgtcgctattcacgac
ggttatacgttggatgatccgaatcgtccgaaaaaatatagcccacaacaatattttcgt
agcgaacaggagatgtgcgagctgttcgccgatctgccacaggcactcgaaaacagcgtt
tatattgcgcaacgttgtaatgtcaccattcgcttaggtcaatattttctaccgcaattc
ccgaccggcgatttaagcactgaagactatttaattcagcaagcaaaaaccggtttggaa
caacgtttggcagtgcttttccccgacgaacaggaacgccaacaaaaacgggctaaatat
gatgaacgcttggaaaccgaactcaaagtgatcaaccaaatgggcttccccggttacttt
ctaatcgtgatggaatttatccaatggtcaaaagataacaatattccggttgggccgggg
cgaggttcaggtgccggttctttagtggcttattccattcgaattaccgatcttgatccg
ctgcaatttgatctgctttttgaacgtttcttaaatccggaacgtgtttcaatgcccgat
ttcgatgtcgatttctgtatggacggtcgcgaccgcgtgattgaacacgtggcacagatg
tatggacgggatgctgtatcgcaaattatcacgttcggtactatggcagcaaaagcggta
attcgagatgtcggacgcgtgcttggtcacccgtatggttttgtcgatcgcattgcaaaa
ctgattccgcctgatcccggtatgactttacaaaaagcatttgatgccgaaccaaaatta
gttgaggcctacaacagcgatgaagaggttaaagagctgatcgatatggggcggaaattg
gagggaattacccgaaatgccggtaaacacgccggtggcgtggtgatttcgccaagtaaa
attaccgacttttcgccaatttactgtgattccgaagggaaacacccggttacccatttt
gataaaagcgatgtcgaatatgccggcttggtgaaattcgacttcctaggcttacgcacg
ctcactattatccaatgggcggttgatatgattaatgaacgtatgcgccgtgaggggaaa
ccggaaatcgatattcatcatattccgttggatgatgaaaaatcctttaaattgctgttg
gatgcacaaacaacagcggtcttccagcttgaatcgcgtgggatgaaagacctcatccga
cgtttaaaaccggactgttttgaagacatcatcgcattggtggcgttattccgtccgggc
ccattacaatccggaatggtagacaactttattcgtcgtaaacacggtgaagaggaaatt
tcctatcctgatgccgaatatcaacatcaatcgcttaaaccgattttagacccgacctac
ggcattattttatatcaagaacaggtgatgcaaattgcacaggttcttgccggttacact
ttgggcggtgcagatttgttacgtcgtgcaatggggaaaaagaaaccggaagagatggct
aaacaacgttctgtcttcaaagagggcgcaattaaaaacggcgttgacggtgaattggca
atgaaaatcttcgatttggtggaaaaattcgccggttacggtttcaacaaatcacactcc
gccgcctatgcgttggtttcctatcaaacactttggctaaaagcacacttcccagccgaa
tttatggcagcggtaatgacgtcggaaatggacaaagtggaaaaaatcgtcaatttctat
gatgaaagcttacggatggggttaaaagtcgtgccacctgatattaataccggcaaatac
ggcttcagcgtaaatgaaaaaggggaaatcgtttatggcttaggggcaattaaaggtgta
ggcgaagcgccggtggaaaatattattgaagccagaacatcaggcggtctgttccgtgat
ctgtttgatctttgcgccagagtcgatttacgcaaaattaaccgccgtacttttgataat
ctgatcaaagccggtgccttagataaacttggacctcaccgtgcggcgattgctttaaat
ttggaagatgccctcaaggcttcagatcaacacgccaaagatgaagcgttgggtcaaacc
gatatgttcggcgtactggcaagttcaccgaaacaggtagagcaagcctatgccaatacc
cctaaatggacagaaaaaatggtattggacggcgaacaggaaaccttgggtttatattta
agcagccatcctatcagccgttatttaaaagagttatctcactacagtaaccgtttatcc
gaagtgagcgtcactcgccgcggcgaaagctgcacggtttctggcttggtggttaatttc
cgttcattggtcacgaaacgtggtaatcgcttaggtattcttaccttggatgaccgctcc
gccagaatggatattacgctgttctccgatgcattggatcaatttgaagaaaaaatccat
aaagatcatattgttatcgttagcggatcagttattccggatgacttcaccggcggcatc
cgaatgattgccagagagatcaatacactggaagagatccgccagcgtgtagtaaaaagt
ttagcgattgcgattaaacaggagcagttgaataacgactttatcgaccgctttaaacag
atcttaactccttatgcacaaggcaccattccgattcatatctattatgacagcccgaaa
ggtcgggcaatgctgactttaggcattgaatggcgtattacaccgcacgatgatctgatt
tccgatttaaccgcttttgtcggtgaagaacaggttgagttggagtttaattaa
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