Gallibacterium anatis: UMN179_01853
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Entry
UMN179_01853 CDS
T01482
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
gan
Gallibacterium anatis
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gan03016
]
UMN179_01853
Enzymes [BR:
gan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
UMN179_01853
Transfer RNA biogenesis [BR:
gan03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
UMN179_01853
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
DUF2274
Motif
Other DBs
NCBI-ProteinID:
AEC17868
UniProt:
F4HDH8
LinkDB
All DBs
Position
complement(1999654..2001630)
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AA seq
658 aa
AA seq
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MLLDNPLLSQLKQQIRDSKPHVEGVVKATDKAFGFLECDKKSYFIPPQAMKKLMHGDKIK
ALIDTVGDKEQAEPDSLIEPMLTRFIARVRFNKENKLQLLVDHPNIKLAIPANQHKKVKE
TLNAGDWVVAELKTHPLRDDRFFFAQVTQFVCYADDPQTAWWVTLARHQQPRTAVAGLAE
YPFEETAIRQDLTDLNFVTIDSETTEDMDDALTIKPILENQQQIGWKLSVAVADPTAYIP
LDSQIEADAKQRCFTNYLPGFNIPMLPRELSDDLCSLMENEKRPALVCEIETDMQGAVIA
EPIFTLAWIRSKAKLAYDAVSDYLENRENSWQPQNEVVKTQIDYLHQFSLARIEWRTKNA
IMFKDRPDYNFILDENGAVAEIRADHRRIANRIVEECMIIANSCAAKFLAQHQAAAIFNT
HSGFDSKFLSAASAFLLNHLATDDNSDQLTPRYAPEQLATLSGYCDMQHDLDRLGAEYLE
ARLRRYLTFAEFKAEVAPHFGLGLAEYATWTSPIRKYCDMVNHRTIKAILQQQTPAKVED
SVLARLQEARKQNRMVERDIADWLYCIYLADKVAEKTIYPAQIIDIMRGGLRVQLLENGA
MIFVPMSLIHDKKEEIEVNSDDIALYIKGERRYQLTDKLNIQLTEVNLDTRSIIGQPV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttgataatcctcttcttagccaactcaaacaacaaatccgtgacagcaaaccg
cacgttgagggcgtggtaaaagccactgataaggctttcggttttttagaatgtgataaa
aaaagttattttattccgccgcaagcaatgaaaaaattgatgcacggcgacaaaattaaa
gcattaatcgacactgtcggtgataaagagcaggcagagcctgacagtctgattgaaccg
atgttaacccgttttatagccagagttcgttttaacaaagagaataaattacaacttttg
gttgatcatcccaatattaaattggcgattcctgccaatcagcataaaaaagtgaaggaa
acactgaacgccggagattgggttgtcgctgaattaaaaacgcacccattgcgtgatgat
cgttttttctttgcgcaagttacccaatttgtctgttacgctgatgacccgcaaaccgcg
tggtgggtaacgcttgcccgtcatcaacaacctcgtaccgcagttgccggtttagcggaa
tatccttttgaggaaacagcgatccgtcaagatcttaccgatctgaattttgtcaccatt
gactcggaaaccaccgaagatatggatgatgcattaaccatcaagccgattcttgaaaat
cagcagcagattggctggaaactgagtgttgcggttgctgatccgacagcttatattcca
ctggattcacaaattgaagccgatgcgaaacaacgctgttttaccaactatcttcccggc
ttcaacattccaatgttgccgcgcgaattatcggacgatctctgttcattgatggaaaac
gaaaagcgtccggcgttggtgtgtgagattgaaaccgatatgcaaggtgctgtgattgcc
gagccgatttttactttagcgtggattcgttccaaagcaaaattggcatatgatgcggtt
tccgattatttggaaaatcgtgaaaacagctggcaaccacaaaatgaagtggttaaaaca
caaatcgattatttgcatcaattcagtttggctagaattgaatggcgtactaaaaatgcg
attatgtttaaagatcgtccggattataacttcattctggatgagaacggtgctgtagcg
gaaattcgtgccgatcatcgccgtattgccaaccgtattgttgaagagtgtatgattatt
gccaacagttgcgctgctaaattcttagcgcaacaccaagcagcagccattttcaatacg
catagcggttttgacagcaaattcttaagtgccgccagtgcttttttacttaaccatctg
gcaaccgatgataatagcgatcagcttacgccacgttacgcacccgaacaattagcaacg
ctgtcgggttattgtgatatgcaacacgatttggatcgtcttggcgcagaatatctggaa
gcaagattacgccgctatcttacttttgcagaatttaaagcagaagtcgcaccgcatttc
ggtttaggtttagccgaatatgcaacttggacatcacctattcgtaaatattgtgatatg
gtcaatcaccgtacgattaaagcgattcttcagcaacaaacgccagctaaggttgaagat
tcagtattggcgcgcttgcaggaagcacgcaaacaaaatcggatggttgaacgtgatatt
gccgattggctttattgcatttatcttgccgacaaagtcgctgaaaaaacaatttatccg
gcacaaattattgatattatgcgtggcggtttgcgcgtgcagctgcttgaaaacggcgcg
atgatttttgttcctatgtcattgattcacgataaaaaagaggaaattgaggtcaatagc
gatgatattgcgctttatattaagggcgaacgccgctatcaactcactgataaactcaat
attcaattaactgaagtgaatttagacaccagaagtattatcgggcaaccggtctaa
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