Gallibacterium anatis: UMN179_01960
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Entry
UMN179_01960 CDS
T01482
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
gan
Gallibacterium anatis
Pathway
gan02024
Quorum sensing
gan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMN179_01960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UMN179_01960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gan03019
]
UMN179_01960
03036 Chromosome and associated proteins [BR:
gan03036
]
UMN179_01960
Messenger RNA biogenesis [BR:
gan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
UMN179_01960
Chromosome and associated proteins [BR:
gan03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
UMN179_01960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AEC17973
UniProt:
F4HE12
LinkDB
All DBs
Position
complement(2116832..2117107)
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AA seq
91 aa
AA seq
DB search
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARAISHHNHQANAVNQEEDAVVTNEEE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggacaatcattacaagatccttatttaaacgcacttcgtcgtgaacgtatt
cctgtttcaatctacctcgtaaacggcattaagttgcaaggtcaaatcgaatcattcgac
caatttgttatccttcttaaaaatactgtaagccaaatggtatataaacacgctatttct
actgttgtccctgcacgggcaatttctcatcataatcatcaagcaaatgcagtcaatcag
gaagaagatgctgttgtaacaaacgaagaagagtaa
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