Gallibacterium anatis: UMN179_02470
Help
Entry
UMN179_02470 CDS
T01482
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gan
Gallibacterium anatis
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gan03032
]
UMN179_02470
03400 DNA repair and recombination proteins [BR:
gan03400
]
UMN179_02470
Enzymes [BR:
gan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
UMN179_02470
DNA replication proteins [BR:
gan03032
]
Prokaryotic type
DNA Topoisomerases
UMN179_02470
DNA repair and recombination proteins [BR:
gan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UMN179_02470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF4795
DUF7351
Zn_Ribbon_TF
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEC18477
UniProt:
F4H9M4
LinkDB
All DBs
Position
2638001..2640607
Genome browser
AA seq
868 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNSYIVKSSVGHIRDLPTSGSGNGEKAKPVSTKGLSAEE
KAKIKQKKERDALVKRMGIDPYHNWKANYQILPDKEKVVSELKSLAKKSDHIYLATDLDR
EGEAIAWHLREVIGGEDERFSRVVFNEITKNAITQAFSHPEQLNMDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEYWQIAVETKNAEQQLL
PFEVTHYQSKPLQIKDKQSADKATETLKNSRYIVTEVETKPTQSRAKAPFITSTLQQTAS
TRLGFGVKKTMLLAQRLYEAGYITYMRTDSTNLSQDALTMARAYISDNFSAAYLPEKPNF
YSSKENAQEAHEAIRPSDIQLKADDLQGMEKDAIRLYDLIWRQFLACQMTAANYDSTTVT
ATADDYTLKVKGRVLRFDGWTKVLPPLGKNAEDRVLPEVKKGEELTLLQVIPSQHFTKPP
ARYTEAALVKELEKRGIGRPSTYASIISTIQDRGYVRTENRRFYAEKMGEIVTDRLNESF
PDLMNYDFTANMEDVLDQIAAGKTDWKQQLNQFFADFSTKLSQAELDELEGGMKPNHLVE
TNIPCPSCGRPMAIRTASTGVFLGCTGYALPPKERCKTTINLIPEAELLNVLDDNSETKA
LMERKRCPKCGTAMDSYLIDAHRKLHICGNNPNCDGYVVEEGQFKIKGYDGPVVECDKCG
ADMHLKLGRFGKYMACTQCDNTRKILKNGEVAPPKEDPIPFPELKCEKSDAYFVLRDGAS
GVFMSAHNFPKSRETRPAKVSELAQYRDRLPEKLQYLADAPQQDPEGNPTVIRFSRKEKR
QYVNSEKEGKATKWIADYIDGKWVARAK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcgttagttattgtggaatcacctgccaaggctaaaaccattaataaatat
ttaggcaacagctatattgttaaatcaagtgtcggccatattcgtgatttgccgacttcc
ggcagtggcaatggtgagaaagcgaagccagtttccacaaaaggattaagtgcggaagaa
aaagctaaaattaaacaaaagaaagagcgcgatgcgttagtgaaacgtatgggcattgac
ccttatcataattggaaagcaaattatcaaattcttccggacaaagaaaaggttgtcagt
gaattaaaatctttagcgaaaaaatctgatcatatttatctcgcaaccgacttggataga
gaaggagaagcgatcgcgtggcatttgcgcgaagtgatcggtggtgaagatgagcgcttt
agccgcgttgttttcaatgaaattacgaagaatgcgattacacaggcattcagtcatccg
gaacaactcaatatggatcgtgtaaatgcacaacaaactcgccgttttctggatcgcgta
gtgggttttatggtgtcaccgttgttgtggaaaaaggtggcacgaggtttgtctgccgga
cgtgtgcaatcagtagcagtaaaattgttggtagagcgtgaacgagaaattaaagcgttt
caaccggaagagtattggcaaatcgcagtggaaacaaaaaatgcggagcagcagttattg
ccttttgaagtaacgcattatcaatccaaaccattgcaaataaaagataaacaaagtgcc
gacaaagcaacggaaaccttaaaaaattcacgttacattgtcactgaagttgaaacaaaa
ccgactcaatcacgcgctaaagccccctttattacctcgacattgcaacagaccgccagc
actcgtttagggtttggcgtgaagaaaaccatgttgttggcacaacgtttatacgaagcc
ggttatattacctatatgcgtaccgactcgactaatttgagtcaggatgcattgacgatg
gcaagagcatatatttccgataatttcagtgccgcttatttacctgaaaagccgaatttt
tactcgagtaaagagaatgcgcaagaggcacacgaagcgattcgcccttccgatattcag
ttaaaagcagatgatttacaaggaatggagaaagatgcaattcgtctttatgatttaatt
tggcgtcaattcttggcgtgccaaatgacagcggcgaattatgattctacaacggtaacg
gcgacagcagatgactacaccttgaaagttaaagggcgtgtattgcgttttgatggttgg
acaaaagtattgccgccacttggtaaaaatgcggaagatcgtgttttgccagaggtgaaa
aaaggtgaagagttaacactcttgcaagtaataccaagccagcatttcactaaaccgcca
gcacgttatactgaagcggcattggttaaagagttggaaaaacgcgggattggtcgccca
tcaacttatgcctcgattatttcgactattcaggatcgtggttatgtacgcacagaaaat
cgccgtttttatgcagaaaaaatgggagaaattgttaccgatcgccttaatgaatctttc
cctgatctaatgaattatgattttacagccaatatggaagacgtattggatcaaattgca
gcaggaaaaacagattggaaacagcagttaaatcaattctttgctgatttctcaactaaa
ctttcacaagcagaattggacgaattggaagggggaatgaaaccgaatcatttggttgaa
accaatattccttgcccaagttgtggtcgtccaatggcgatccgtactgccagtaccggc
gtatttttaggttgtaccggctatgctttgccgccaaaagagcgttgtaaaaccacaatt
aatttaattccggaagcggaattgttgaatgtgcttgatgataattcagaaaccaaagcg
ttaatggaacgtaaacgttgtccgaaatgcggtacggcaatggacagttatttaatcgat
gcgcaccgtaaattgcatatttgtggtaataacccgaactgtgacggctatgtagttgaa
gaggggcagtttaaaattaaagggtatgatggaccggtcgttgagtgtgataaatgcggt
gcggatatgcatttaaaattaggccgtttcggtaaatatatggcgtgcacacaatgcgat
aatactcgtaaaatcttaaaaaatggtgaagttgcaccaccgaaagaggatccaatacca
ttccctgaattaaaatgtgaaaaatcggatgcctattttgtcttgcgtgacggtgccagt
ggtgtctttatgtcggcgcataatttcccgaaatcacgggaaactcgtccggcaaaagtg
tcggaattggcacaatatcgtgatcgtttgccggaaaaactgcagtatttagccgatgca
ccgcagcaagatccggaaggtaatccgacggtgattcgttttagtcgtaaagagaaacgc
caatatgttaactctgagaaagagggtaaggcgaccaaatggattgctgattatattgac
ggcaaatgggtagcaagagcaaaatag
DBGET
integrated database retrieval system
