Geobacter anodireducens: A2G06_00180
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Entry
A2G06_00180 CDS
T04399
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
gao
Geobacter anodireducens
Brite
KEGG Orthology (KO) [BR:
gao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gao03016
]
A2G06_00180
Enzymes [BR:
gao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
A2G06_00180
Transfer RNA biogenesis [BR:
gao03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
A2G06_00180
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
ANA41548
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All DBs
Position
complement(45718..46257)
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AA seq
179 aa
AA seq
DB search
MYRLFVAIDLPDSIRAQLADLGRELDDARRVPPDQLHLTLRFIGGADNECLQRIKDALAT
VTSPPFSLALAGVGCFPSPGRPRVIWAGITADERLVLLQGAVEKAVAAAGIPPEERRFSP
HITLARLKDAESTGFTVFKAKQGGFRTEPFTVEAFHLYSSTLTADGALHRREASYPLNG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtcttttcgttgccattgatctgcccgattccatcagggcacagcttgccgat
ctcggccgggaactggacgatgcccgcagagttccgcctgaccagctccatctgaccctc
cgctttatcggaggcgcggacaacgaatgccttcagcggatcaaagacgccctggcgacc
gtcacgtcaccaccttttagcctggccctggcaggggtcggctgtttcccatccccaggg
cgcccccgcgtgatctgggctgggatcaccgccgacgagcggctggtcctcctgcagggc
gcggtggaaaaggccgttgcagcggcggggatccccccggaggagcgccggttttccccg
cacataacgctggcgcgcctcaaggatgccgaatcgacgggtttcaccgtttttaaggcc
aaacagggcgggttcagaacggagccgttcaccgtggaggcattccacctctattcgagc
accctgactgcggacggcgccctgcaccggcgcgaggcatcctatccattgaacggctga
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