KEGG   Geobacter anodireducens: A2G06_02490
Entry
A2G06_02490       CDS       T04399                                 
Name
(GenBank) recombinase RecD
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
gao  Geobacter anodireducens
Pathway
gao03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    A2G06_02490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gao03400]
    A2G06_02490
Enzymes [BR:gao01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     A2G06_02490
DNA repair and recombination proteins [BR:gao03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A2G06_02490
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 OB_YrrC SH3_13 UvrD_C_2 HHH_5 Viral_helicase1 AAA_11 Helicase_RecD PIF1 NTPase_1 nSTAND3 AAA_16 AAA_22 RsgA_GTPase AAA_28 HHH_2 NACHT HHH AAA TrwB_AAD_bind AAA_29 T2SSE ABC_tran NPHP3_N cobW ATP_bind_1 AAA_5 UvrD-helicase MMR_HSR1 TraI_hel_assoc_N DEAD SLFN-g3_helicase Pirin MeaB AAA_14 AAA_7 TsaE KTI12 NB-ARC
Other DBs
NCBI-ProteinID: ANA39439
LinkDB
Position
526404..528584
AA seq 726 aa
MKTATSTDTAVERLAGSVERVTFHSEESGFCVLRAKVKGQRDLVTVVGSAASITPGEFIE
CIGVWHNDRTHGLQFKARQLKVVPPSTVEGIEKYLGSGMVKGIGPHFAKVLVKAFGENVF
TVIENDPEKMLSLPGIGKKRVEKITSAWAEQKVIREIMVFLQSHGVGTARAVRIYKTYGD
EAIIKVTENPYRLALDIHGIGFKTADVIAGRLGIAPDSLIRAQAGVRHVLQEISNDGHCA
APVETLVAESGKLLQIPEAILEEAIREEITAENLVKEEIEGRECLFLAPLHRAEVGVAAS
IKRILEGRPRWGAIDADKAIPWVEGKTGLTLSASQGEAVRLALSSKAVVITGGPGVGKTT
LVNSILQIVRAKQINVTLCAPTGRAAKRLSESTGLEAKTIHRLLEFDPKSFGFKRGRDNP
LETDLLVVDESSMVDIVLMNRLLAAVPDKAALMIVGDVDQLPSVGPGAVLSDIIDSGKVP
TVRLTEIFRQAATSRIIVNAHRINKGEMPLKAEGAELSDFYFIPANTPEEIHEKLLQVVT
ERIPKRFGMHPVKDIQVLTPMNRGGIGARSLNAELQMKLNEKGEPKITRFGTTFAPGDKV
IQTVNNYDKEVFNGDIGQIMGIDQEEGALQVDYDGRTIEYDFGELDEVSLAYATSIHKSQ
GSEYPAVVIPLAMQHYTLLERNLIYTAVTRGKKLVIIIGQPKALAMAVKNRKSTRRMTKL
AVRLAE
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgaagacagcaacctctaccgatactgccgttgaacggcttgccggctctgtggaacgg
gtgaccttccacagcgaggaatcgggcttctgcgtcctgcgcgccaaggtcaagggacaa
agagatctggttaccgtcgttggctccgcggcatccatcacccccggcgagttcatcgag
tgtattggcgtctggcacaacgacaggacccacggtctgcaattcaaggccagacagttg
aaggttgttcctcccagcaccgtcgaggggatcgagaagtatctcggttccggcatggtc
aaagggatcggaccacattttgccaaggtactggtgaaagccttcggggaaaacgtcttc
accgtcatcgagaacgacccggagaaaatgctttctctcccgggcatcggcaagaaacgt
gtggagaagataacctctgcctgggccgaacagaaagttatccgggagatcatggtgttt
ctccagtcgcacggagtaggcacagcccgggctgtccgcatctacaagacttacggcgat
gaagcaatcatcaaggttaccgaaaatccttaccgtttagccttggacatccacggcatc
ggtttcaagaccgcggacgtcattgccggccggcttgggattgccccggactctctgatt
cgtgcgcaagccggcgtccgccatgtcttgcaggaaatctccaacgacggacactgcgcc
gccccggtggagacgttggtggcggagtcgggcaaattgctgcaaattccagaggcgatt
ctggaagaggccatccgcgaagagatcactgcggagaacttggtcaaggaggaaatcgaa
gggcgcgaatgtctgtttctggccccgttgcatcgggcagaggtcggggtggcggcaagc
atcaagagaatcctggagggacggcctcgctggggtgcaatcgacgcggacaaggccatc
ccgtgggtggagggaaagacaggcctaactctttcggcttctcaaggagaggcggtgaga
ctcgccttgtccagcaaagcggtggtcattactggtggcccaggtgtcggtaagactacg
ttggtcaacagcatcctccagatcgtccgggcgaaacagattaacgttaccctctgtgcc
cccacggggcgggctgcgaaacgactttccgaatccactggccttgaggccaagaccatt
cacaggctgctcgagttcgatccaaagtcgtttggattcaagcgagggcgggacaacccc
cttgaaaccgatctgttggtagtggacgaatcctcgatggtggacatcgtcttgatgaac
cgactgcttgcggctgttcccgataaggcagcactgatgatagtcggcgatgtagaccaa
ctcccctctgtgggccctggagcggtgctttccgacatcatcgattccggcaaagtccca
accgttcggctgacggaaattttccggcaggcggcgacctcccggatcatagtcaacgcc
catcgcattaataaaggcgagatgcccctgaaggcagagggtgctgagttgtctgatttc
tatttcatcccggcaaacactccggaagaaatccacgagaaactgctgcaagtggtcacg
gagcgcatccccaagcggttcggcatgcatccggttaaggacatacaggtcctcaccccg
atgaaccgcgggggcatcggtgcccggtctctgaatgcagaattgcagatgaagctaaac
gagaagggcgagccgaaaatcactcgcttcgggacgactttcgcccccggcgacaaggtg
atccagactgtcaacaactacgacaaggaagttttcaacggcgatattggacagatcatg
gggatcgaccaggaggaaggcgctctgcaggttgactacgacggcagaaccatcgagtat
gatttcggtgagttggatgaggtgtcacttgcctatgcgaccagtattcacaagagccag
ggttccgaatacccggcggttgtgatccccttggctatgcagcactatacccttttggag
cggaacctgatctacacggccgtgacacgagggaagaagcttgtaatcattattggccaa
cctaaagccttggcaatggctgtgaagaataggaagtccacgagaagaatgacgaagttg
gcagttcggcttgctgaatga

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