Geobacter anodireducens: A2G06_02790
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Entry
A2G06_02790 CDS
T04399
Name
(GenBank) RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
gao
Geobacter anodireducens
Pathway
gao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A2G06_02790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gao03019
]
A2G06_02790
Enzymes [BR:
gao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A2G06_02790
Messenger RNA biogenesis [BR:
gao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A2G06_02790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ANA39486
UniProt:
A0ABR9NYU6
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All DBs
Position
587447..588778
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AA seq
443 aa
AA seq
DB search
MKFADLSLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLF
TKLLRSGRGGERRHPRALILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNA
LKEGADVVVGTPGRLIDYLKQKVYSLKEIEVLVIDEADRMFDMGFIADLRFILRRLPPYD
KRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKEKFPLLLGL
LRREGMARTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKDGTLPIL
IATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISMADEDGAFHLEA
IHEYIKDKIPVEWAEDELFVHDFKRVKPRPKGQETRAKGPTRHGRKHPEAEKKEPEGEKK
KRRRPRRKKNPADGGGGTPPAAE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgccgacttgagcctgcccgagcaggttatgcagggggtggcggacgcgggc
ttcagcgactgcacccccattcaggaaaaaaccctgcccctctcgctggggggaaaggat
gtggccggccaggcccagaccggcaccggcaagaccgcggccttcctgatcagcctcttt
accaagctcctccgttccgggcggggaggagagcgccgccatccccgcgccctgatcctc
gcccccacccgcgagctggtggtccagatcgagaaggacgcccaggtgctcggcgcccac
tgcgggttcaccatccaggccatctacggcggggtggactacatgaagcagaaaaacgcc
ctcaaggagggggccgacgtggtggtcggcacgccgggacggctcatcgactacctgaag
cagaaggtttactcgctcaaggagatcgaggtgctggtcatcgacgaggcggaccggatg
ttcgacatgggcttcatcgccgacctccgtttcatcctccggcgccttcccccctacgac
aagaggcagaacctgatgttctccgccaccctgaaccagcgcgtgatggagcttgcctac
gagttcatgaacgtccccgagaaggtggcggtcacccccgaacagatgacggccgagcgg
gtggagcaggtcctctaccacgtgggacggaaggagaagtttccgctgctgctggggctc
ttgcgcagagaagggatggcgcggaccatgattttcgtcaacaccaagcgtgaagcggag
ttcctggatgagcggctcaacgccaacgatttcccctgccgggtcatctccggcgacgtg
gaacagcgcaagcgactgaaaatactggaagatttcaaggacggcacactgccgatcctg
atcgccaccgatgtggcctcgcgggggctccacatcgacggggtctcccacgtcatcaac
tacgatctcccccaggacgcggaggactacgtccaccgcatcggccgcaccgcccgggcc
ggcgccgaggggaaagcgatttccatggccgacgaggacggtgcgttccatctggaggcg
atccacgagtacatcaaggacaagatcccggtggagtgggccgaagacgagctcttcgtg
catgatttcaagcgggtgaagccgcggcccaagggccaggagacccgggccaagggtccc
acccgtcacggcaggaagcacccggaggccgagaagaaggagccggaaggggagaagaag
aaacggcgccggccccgtcgcaaaaagaatccggctgacggcggggggggcacgcctccg
gccgcggagtag
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