Geobacter anodireducens: A2G06_11110
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Entry
A2G06_11110 CDS
T04399
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
gao
Geobacter anodireducens
Pathway
gao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A2G06_11110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gao03019
]
A2G06_11110
Messenger RNA biogenesis [BR:
gao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A2G06_11110
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
DivIVA
KH_KhpA-B
KH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ANA40736
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All DBs
Position
complement(2423646..2425208)
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AA seq
520 aa
AA seq
DB search
MKIELAIIFIVLAAGAGFLIGNLLRKKLSDSLVSKAEELASRIVDDAKREAETISKEAAL
QAKDVVYQAKADFEREAKEKHKDLQSLEKRLQQKEENLDKKMNLFDQRDADLTKKEQGIL
AREQSLAKKEDSLDALAAEQRTKLEQISGMTSAEAKKILMDAMESEAKLDAAKRIKAIEE
EARETADKKSKEIISLAVQRYAGEYVAEKTVSVVALPSDEMKGRIIGREGRNIRALEAAT
GIDLIIDDTPEAVILSGFNPVRREVAKIALEKLIADGRIHPGRIEEVVAKAEEEVEQAVK
EAGDQAAFDLGVHGIHPEILKLIGRLKYRTSYSQNVYQHSLEVAFLCGIMASELGVNVKQ
AKRAGLLHDLGKAVDHEVEGSHAVIGAELARKYGESPKIVHAIMAHHEDEKPNSILAVLV
QAADALSGARPGARREMMETYVKRLEDLERIACSFGGVNNSFAIQAGREIRVMVSSEEVS
DERAVLLAKDIAKKIEAEMTYPGQIKVNVIRETRAIEYAR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatagaactggcaattattttcatcgtcctcgcggcaggagcgggatttctgatc
ggaaacctgctgcgcaagaaactctctgattctctggtaagcaaggccgaagaactcgcc
tcccgcatcgttgacgatgccaagcgcgaagcggagacgatcagcaaggaagccgctctc
caggccaaggatgtcgtctatcaggccaaggccgacttcgagcgggaagcaaaggaaaaa
cacaaggatcttcagagcctggaaaagcgcctccagcagaaggaagagaacctcgacaaa
aagatgaacctcttcgatcagcgcgatgccgacctgaccaagaaggagcagggcatcctc
gcacgcgagcagtcgctcgcaaaaaaagaggactcccttgatgcgctcgcggccgagcag
cggaccaagctggagcaaatctccggcatgacctcggccgaagcgaaaaagattcttatg
gatgccatggagagcgaggccaagcttgatgccgccaagcggatcaaggccatcgaagag
gaggcacgcgagaccgcggacaagaagtccaaggaaatcatatcacttgccgtccagcgg
tatgcgggcgagtatgttgccgaaaagaccgtatcagtggttgccttgccctccgacgaa
atgaagggccggatcatcggccgtgaaggtcgcaatatccgcgcccttgaggctgccacc
ggcatcgacctcattatcgacgatacccccgaggcggtcatcctttcaggcttcaacccg
gttcgccgcgaagtggcaaagatcgcccttgaaaaactcatcgcggacggacggattcac
cccggccgcattgaagaggtggtggccaaggcagaggaagaagtggaacaggccgtcaag
gaggctggcgatcaggcggccttcgaccttggcgtgcacggcatccaccctgagatcctc
aaactcatcggtcggttgaaataccgtacatcttacagccagaacgtataccagcactcg
ctggaggtcgcctttctctgcggcatcatggcctcggaactgggcgtcaacgtcaagcag
gcaaagcgcgccggtctgctccacgacttgggcaaggcggtggaccacgaggtcgaagga
tcccacgcggtcatcggcgccgaacttgcgcgtaaatatggcgagtcgcccaagattgtc
cacgccatcatggcccatcacgaggatgagaagccgaattcgatcctcgccgttctcgtt
caggccgccgacgccctctccggcgcacggccgggggcgcgccgggaaatgatggaaacg
tacgtgaagcggctcgaggaccttgagcggatcgcctgctcctttggcggtgtaaacaac
tcctttgccattcaggccggcagagaaatccgcgtcatggtgtcgagcgaggaggtgtcc
gacgagcgggccgttctgctggccaaggacatcgccaagaaaatcgaggccgagatgacc
tatcccggccagatcaaggtgaatgtcatccgggaaacccgcgccatagagtatgcccgt
taa
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