Geobacter anodireducens: A2G06_12100
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Entry
A2G06_12100 CDS
T04399
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
gao
Geobacter anodireducens
Pathway
gao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A2G06_12100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gao03019
]
A2G06_12100
Enzymes [BR:
gao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A2G06_12100
Messenger RNA biogenesis [BR:
gao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A2G06_12100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
NAT10_TcmA_helicase
AAA_22
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
ANA40891
UniProt:
A0ABR9NRX0
LinkDB
All DBs
Position
complement(2646443..2647786)
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AA seq
447 aa
AA seq
DB search
MDFTSFGFHPAVAGGVAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPIL
HRLQQGERGCVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAG
AEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTLL
FSATMPIDIRKLAQDILVDPVTVQVGNVAPAVTVTHALYPVEQHLKTPLLMELLRHTDTE
SVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIAA
RGIDVSQVSHVINYDIPDTAEAYIHRIGRTGRAARSGDAFTLVTSDDGAMVRAIERSLGA
TIERRTVQGFDYSVPAPKKDVEFARPPREPRQARPHASQPKKGGTAASPAASGRPSHPKD
PGRRQPGQGAPASGPSRQRSGSPRRPR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggatttcacatcgttcggttttcatccggccgtggccggaggggttgcggccgccggc
tacgagacccccacgccgatccaggcccaggccatccccgcggtcatggcggggcgcgac
gtcatggggctggcccagaccggcaccggcaagacagcggcctttgccctgccgatcctg
caccggctgcagcagggagagcgcggctgcgtccgggccctggtcattgcccccacccgc
gagcttgcggagcagatcaacgacagcttcgtcaccctggggcgacagacccgcctgcgg
agcgtgacggtctacggcggggtaggcgtgaatccccaggtgcagaagctcaaggccggc
gccgaagtggtcgtggcctgcccgggacggctcctggaccacatcgcccaggggaccatc
gacctgtcgcgcctggaggtgctcgtcctggacgaggcggaccagatgttcgacatgggc
tttctccccgacatccggcgggtgctcaagcatctccctccccggcggcagacgctgctc
ttctcggccaccatgcccatcgacatccgcaagctggcccaggatatcctggtggacccg
gtgacggtgcaggtggggaacgtggccccggcggtcaccgtaacccatgccctctacccg
gtggagcagcatctgaagacaccgctgctcatggagcttctccgccacacggacaccgag
tcggtgctgatcttcacccgcaccaagcaccgggccaagcgcctgggcgaacagttggaa
aaggccggctaccgggcggcatccctccaggggaacctctcccagaaccggcgccaggca
gccctggacggcttccgggacggcaccttccagatcctggtggccaccgatattgcggcc
cgcggcatcgacgtgagccaggtgtcccacgtgatcaactatgacatccccgacacggcc
gaggcatacatccaccggatcggccgcaccggccgcgcggcccgcagcggcgacgccttc
accctggtgacctccgacgacggggccatggtacgtgccatcgagcggagcctcggtgcc
accatcgagcgccgtaccgtgcagggcttcgactactcggtgccggcgccgaaaaaggat
gtggaattcgcccgtcccccccgggagccgcgccaggctcgcccccacgcaagccaaccc
aagaaagggggcacagcggcatcccccgcggcgtccggccggccgtcccatcccaaggac
ccgggccggcggcagccgggccagggagcgcccgcctcggggccgtcgcgccaacggtcc
ggaagcccccggcggccccgctga
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