Gilliamella apicola: GAPWK_0009
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Entry
GAPWK_0009 CDS
T03066
Name
(GenBank) Oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
gap
Gilliamella apicola
Pathway
gap00040
Pentose and glucuronate interconversions
gap01100
Metabolic pathways
gap01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GAPWK_0009
Enzymes [BR:
gap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
GAPWK_0009
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GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Tricorn_N
Tricorn_2nd
DPPIV_N
Motif
Other DBs
NCBI-ProteinID:
AHN24588
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All DBs
Position
12092..13264
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AA seq
390 aa
AA seq
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MAKGNIVRLSYSSFIDEDSKNEIIRLTPEGILCHRNYFYQKCFTNDGQKLLFAGEFDTNR
NYYLLDIKNQTAKQLTEGPGDNTFGGFLSPDDKFLYYVKNERNLQQVNLETLEEKNVYTV
PDEWVGYGTWVANSDCNEIVGIEIDKKDWTPLTDWTIFKAFYNKNPHCRLIKIDIETSVA
KTVIDQNVWLGHPIFRPFDDKTIAFCHEGPHDLVDARIWLVDRDGKNERKAHDNLPGESC
THEFWVPDGSGLAYVSYMKGQQERYIRLYNPVTNEDKEIMEMPACSHLMSNFDGTLYIGD
GTGSPVDVIDTSGYKIENDPWLYILAPKTKTAHKLVKHNSTWRVLDGDRQVTHPHPSFSP
DNKYVLYSCDAQDEPALYLTKVPANILEEM
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagggaaatatcgtaaggctatcatattcatcatttattgatgaagattcaaaa
aatgaaattattcggttaacgccagaaggtattttatgccatcgcaattatttctatcaa
aagtgctttactaatgatggccaaaagctactttttgctggtgagtttgacactaatcgt
aactattatttacttgatattaaaaaccaaacagcaaaacaactaaccgaagggcctggt
gataatacctttggtggttttttatcgccagatgataaatttttatactatgtaaaaaat
gaacgcaatttacaacaagttaatcttgaaactttagaagaaaaaaatgtttatactgta
ccagatgaatgggttggttatggtacatgggttgccaatagtgattgtaatgaaattgtt
ggtattgaaattgataaaaaagattggacaccacttaccgactggacaatatttaaagca
ttttataataaaaacccgcactgtcgtttaatcaagattgatattgaaacaagcgtagct
aaaacagtaattgatcaaaatgtatggttaggacatcctatctttagaccttttgatgat
aaaactatcgcattttgccatgaagggcctcatgatttagttgatgcaagaatttggttg
gtcgatcgtgatggtaaaaatgaacgaaaagcccatgataatttacctggtgagagttgt
actcatgaattttgggttccagatggatcaggtcttgcttatgtgtcttatatgaaagga
caacaagaacgttatattcgcctttataatcctgtgaccaacgaagataaagaaattatg
gagatgccagcttgttcacacttaatgagtaattttgatggcacgctttatattggagat
ggaacaggtagtccagttgacgtaattgataccagtggttacaaaattgaaaatgatcca
tggctttatattttagcacctaaaacaaaaacagcacataaattggttaaacataatagt
acatggcgagttttagatggcgatcgtcaagttactcatcctcatccatcgttttcacct
gataataaatacgttttatactcatgtgatgcacaagatgaacctgcactttatttaacc
aaagtgcctgctaacatattagaagaaatgtga
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