Gilliamella apicola: GAPWK_0054
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Entry
GAPWK_0054 CDS
T03066
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gap
Gilliamella apicola
Pathway
gap03030
DNA replication
gap03410
Base excision repair
gap03420
Nucleotide excision repair
gap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GAPWK_0054
03410 Base excision repair
GAPWK_0054
03420 Nucleotide excision repair
GAPWK_0054
03440 Homologous recombination
GAPWK_0054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gap03032
]
GAPWK_0054
03400 DNA repair and recombination proteins [BR:
gap03400
]
GAPWK_0054
Enzymes [BR:
gap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GAPWK_0054
DNA replication proteins [BR:
gap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GAPWK_0054
DNA repair and recombination proteins [BR:
gap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GAPWK_0054
NER (nucleotide excision repair)
GGR (global genome repair) factors
GAPWK_0054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
HHH_2
EAP30
CTP_synth_N
Motif
Other DBs
NCBI-ProteinID:
AHN24633
LinkDB
All DBs
Position
60483..63257
Genome browser
AA seq
924 aa
AA seq
DB search
MPNNTPIILIDGSSYLYRAFFACPPLTNAKGEPTGAIFGVINMIRSLINQYNPTHIAVVF
DAKGGSFRNEIYSEYKATREAMPENLRPQIEPIHTILKAMGLPLLCIEGVEADDVIGTLA
RQAERENLDVLISTGDKDMAQLVSDKITLINTMNNSVLDPKGVMDKFGVPPEKIIDYLAL
RGDSSDNIPGVPGVGEKTAQSLLTEFTSVKDIYTRLDDIEKLSIRGAKSLKQKLIDNQNE
AELSYLLATIKTDVKLDFTNEQLLITDIDVNKLVELFAYYGFHRWQKELIAGTFLKQQKN
GIAGESLSLLEDQQHSVTAQKKETDYQCILTHEQLDDWVIKLTNSKQFAFDTETDNVDHV
HAKLVGISLSVEPYQAAYIPLAHQYLGVPEQLPLTEVLAKLKPVLENPEIKKIAQNAKFD
YSILANYGIKVSGIAFDTMLESYVLNSTERHDMDSMANRYLNHKTITYDELTKVDKKKVT
IDAIEVEKTTQYAAEDADITLQLHEKLWPELEKDQKLTKLFTDIEMPLAIVLAEMERTGV
LVDAKQLNDYSYELAKQLIEIEAQLQSLAGEKFNPASPKQIQAILFDKHNLPVLKKTPKG
DPSTSEEVLSELANEYELPRMILFYRGLAKLKNTYTDKLPLMISPIDHRIHTNYNQIGTI
TGRLSSNDPNLQNIPVRNEEGRRIRQAFIAPKGCKIISADYSQIELRIMAHLSQDESLLN
AFAHDKDIHRVTAGEILGKAESEVTNEERRRAKAVNFGLIYGMSAFGLSKQINIPRKEAQ
FYIDRYFERYPGVQQYMEQTRQLAAEQGYVETLSGRRLYLPKIRSTNGIEKRGAERAAIN
APMQGTAADIIKTAMIKMSEWIKNQSADNIKMVMQVHDELVFEVKDAFVEQYCTEIKKIM
ENCYQLSVPLKVDVGIGNNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgccaaataacacaccaattatcctaattgatggatcttcgtatctttaccgtgctttt
tttgcatgccctccattaactaatgccaaaggtgagccaactggcgctatttttggtgtg
attaatatgattcgcagtttaatcaatcaatataaccctacccatattgcggtggttttt
gatgcgaagggaggttcatttcgtaatgagatctacagcgaatataaagctacgcgtgaa
gcgatgcctgaaaatcttcgccctcaaattgagcctattcatactattttaaaagcgatg
gggttgcctttactatgtattgaaggagttgaggcagatgacgttattggtaccttagcc
agacaagctgaacgcgaaaatctggacgtgctaattagtactggcgataaagatatggcg
cagttggtgagtgataaaatcacactaattaacacaatgaataattctgtgctagatcca
aaaggtgtgatggataaatttggtgttccacccgaaaaaattattgattatttagcgtta
agaggtgattcctccgataatataccgggtgtgccgggtgtaggtgaaaaaacggcacaa
agcttattgactgaatttaccagtgttaaagatatttatacacgcttagatgatattgaa
aaattatcgatccgtggtgcaaaatccctaaaacaaaaattaattgataatcaaaatgaa
gctgaactttcctatttgcttgctaccatcaaaaccgatgtaaaattagattttactaat
gagcaactgctcattactgatattgatgtcaataaattggttgaattgtttgcttattat
ggctttcatcgttggcaaaaagagttaattgcgggtacgtttctaaaacagcaaaaaaat
ggcatcgcaggtgaaagtttatcgttattggaagatcaacaacattcagttactgcacaa
aagaaagagaccgattaccaatgtatattaacgcatgaacagcttgatgactgggttatc
aagttaaccaatagcaagcaatttgcttttgacactgaaaccgataatgttgatcatgta
catgctaaattagtgggtatatcgctgagtgttgaaccttatcaagccgcctacattcca
ctggctcatcagtatttaggggtaccagagcaattacctttaaccgaggtattagccaaa
ttaaaacctgtacttgaaaacccagagattaaaaaaattgcgcaaaatgctaaatttgat
tacagcatattagctaattatggcattaaggtgagtggtattgcctttgataccatgctt
gaatcttatgtattaaatagtactgaacgtcatgatatggatagtatggcaaatcgttat
ctcaatcataaaaccatcacttatgatgagctcactaaagtagataaaaagaaagttacc
attgatgctattgaagtagaaaaaaccactcaatatgcggctgaagatgccgatattaca
ttgcaactgcatgaaaaattgtggccagaacttgaaaaagaccaaaaattaacaaagcta
tttactgatattgagatgccactggctatagtattagctgaaatggaaagaacaggtgta
ttggttgatgcgaaacaattaaatgactattcttatgagttagctaaacaattaattgaa
attgaagcgcaactgcaatcactcgctggcgaaaaatttaatccagcctcaccaaaacag
attcaagcgattttatttgataaacacaatttacctgttttaaaaaagacgccaaaaggt
gacccttcaaccagcgaagaagtattaagtgaactggctaacgaatacgaattaccgcga
atgattttgttctatcgtggattagctaaattaaaaaatacttatactgataaattacca
ttgatgattagtccaatcgatcatcgtattcatactaactataatcaaatcggtactatc
acggggcgattatcatctaacgatccgaacttacaaaatattccggtacgtaatgaagaa
ggtcgacgtattcgccaagcatttattgcgccgaaaggttgtaaaatcatttctgctgac
tattcacaaattgagttacgtattatggcgcatttgtcgcaagatgaaagtttacttaat
gcttttgctcatgataaagatattcaccgagtaaccgctggtgaaatattaggtaaagct
gaatcagaagtcaccaatgaagagcgaagacgtgctaaagcggttaattttggtttaatt
tatggtatgagtgcttttgggttatctaaacagattaatatccctcgtaaagaagcgcag
ttttacatcgatcgttattttgaacgctatccaggtgttcaacaatatatggaacaaact
cgccaacttgctgctgagcaaggttacgttgaaaccttgtcaggtcgtcgtttgtatcta
cctaaaattagatcaactaacggtattgaaaagcgtggagcggaacgagcagctattaat
gcaccaatgcaaggtaccgcggccgatattatcaaaactgccatgataaaaatgagtgag
tggataaaaaatcaatccgcagataatattaaaatggtgatgcaagtacacgatgaatta
gtatttgaagtaaaagatgcgtttgttgagcaatattgtacagaaattaaaaagattatg
gaaaattgttatcagttatctgtacctttaaaagtcgatgtcggtatcggcaataactgg
gatgaggcgcattaa
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