Gilliamella apicola: GAPWK_0092
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Entry
GAPWK_0092 CDS
T03066
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gap
Gilliamella apicola
Pathway
gap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GAPWK_0092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gap03400
]
GAPWK_0092
Enzymes [BR:
gap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GAPWK_0092
DNA repair and recombination proteins [BR:
gap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GAPWK_0092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AHN24671
LinkDB
All DBs
Position
complement(101641..104841)
Genome browser
AA seq
1066 aa
AA seq
DB search
MFTIYHSNQVDLLKSLVSELMRRDPLEQVFTPDMVIVQSQGMAQWLQIELANDLGILANV
DFPFPSQFIWQIYQILLPDSPTENNYDVESMTWRLYYLLPKIIERPEFETIKHYLNIDKE
ERKHYQLATRIARLFDQYLVYRPDWLAKWEANQTVSELNHHPDEIWQAELWRQLISISLP
YHRANIYQQILDILLDKDFDHLRLNSLPKRVYIFGITSLPPIYLSLLSALGQHIDVHLMF
NNPCKWYWGDIVEKQLSDILNTPDKIPNPLLTSWGKLGRDNLFLLQEFNSKQDIEAFVDQ
ERTCLLHSIQQDILELYQSDLGDKQIDASDKSISFHACHSEQREVEVLYDYLLSVFDTNP
DLELRDCIVMVSDIDRYVPYIRAVFGNARGERYLPFTISDQKARNIDPIVQGFFAILNFP
NSRFTAEDLFNLLEIPAVAEKFSITESQLILLRTWIIESGIRFGLESAHSWLFGLERLLL
GYTMNSEQGGWQQILPYDGATGLDAELIGQLSEFIKVVRKWCTILNEAKSLSDWQGCCLE
LINDFFTHNQQRDAILLMIEDEWQQLINSGLTAQFTGLISITVLHDAMQARLEQNHLAHR
FLVGKINFCTMMPMRSIPFKVVCLLGMNDGDYPRTSLPLDFDLIAKYPRRGDRSRRTDDR
YLFLEAILSTQYQLYISYIGRDMKDNSERYPSVLVDELWEYIVQYYGEPTKNLEKNVNSL
KVLHTRTPFNPVNFLQEPKSYADEWLPAALKKGESQRFISQIPAISVDYINLDELKRFFQ
HSIRLFLQKRFNFYVSYLDDTLPDAENFNLDSLKRYQLNVQILNHLITQTAQDSEVLYQQ
LRLTGELPDGAFGEIIYDEQTEAMQSLADKIRQERLEMTSEEVNLTIEANKQYYPLQGWL
THIQADGILTWRPSKLSIRDGISLWIDHLVYCILYPEKVDNQSRIYGRDEQEWRFSHLEA
NEALTYLTSLVEGFLQGINQPLLMPIQSAWSWLTSAYNKKTGEIVASDRAKSQLINTWQG
GLFQSPEIDSYYERLYPELTDELIEQIIYFAKQFLLPILLNQVTVE
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgtttactatttatcattcaaatcaagtcgatttactcaagtccttagtcagtgaatta
atgcgtagagacccattagaacaggtttttacacccgatatggtgattgtacaaagccaa
ggtatggcgcaatggttacaaattgaattggccaacgatcttggtattcttgccaatgtc
gattttccctttcccagtcaatttatttggcaaatatatcaaatccttttaccagattca
ccgactgaaaataactatgacgtcgaatcaatgacttggcgtttatactatttattgcct
aagatcattgaacgacctgaatttgagacaatcaaacattatctaaatattgataaagaa
gaacgcaaacactatcaattagcaacgcggatagcacgattatttgaccaatatttggta
tatcgtcctgattggttagcaaaatgggaagccaatcaaaccgtaagtgaattgaatcac
catccagatgaaatttggcaagcagaattatggcggcaacttatttcaatcagcctaccc
tatcaccgtgccaatatttaccaacaaatattagatattttgttagataaggactttgat
catttaaggttaaactctttacctaaacgagtttatatttttgggatcacttctcttcca
cctatttatctgtcattactctcagcacttggtcaacacatcgatgtgcatttgatgttt
aataatccctgtaaatggtactggggcgatattgttgaaaaacaactatccgatatttta
aatacaccagataaaatccctaatccattacttacttcgtggggaaaactaggtcgcgac
aatttatttttattgcaagaatttaatagtaaacaggatattgaggcatttgttgatcaa
gaacggacatgtctattgcactcaattcagcaagatattttagagctttatcaaagtgat
ttaggcgataaacaaattgatgcttctgataaatctatctcgttccatgcctgccatagt
gaacaacgggaagtcgaagtattgtacgattatctattatctgtttttgatacaaaccca
gatcttgaactacgtgattgtattgttatggtttcagatattgatcgctatgtaccttat
attcgagctgtttttggtaatgctagaggtgaacgctatttaccatttactatttctgac
caaaaggctcgcaatattgatcccatcgtacaaggtttttttgctattttaaactttcca
aacagtcgattcaccgcggaagatttatttaacttattggaaattccagctgtagctgaa
aaattttccataactgaatcacaattaatattattgcgaacttggattatagaatctggt
atccgctttggtcttgaaagtgcacacagctggttatttggtcttgaacggttattgctt
ggttataccatgaatagtgaacaaggtggatggcaacaaattttaccttatgatggtgca
acaggattagatgcggaacttattggtcaattatctgaatttattaaagttgttcgtaaa
tggtgtacgattttaaatgaagcaaaatcattatctgattggcaaggttgttgccttgaa
ttaattaatgatttttttacgcataatcagcaacgcgatgctattttattaatgatagaa
gatgagtggcaacagttaattaatagtggtttgaccgctcagtttaccggccttatttca
atcactgttttgcatgatgcaatgcaggcacgtttagaacaaaatcacttagcacatcgt
tttttagtcggtaaaatcaatttttgtactatgatgcccatgcgctccattccatttaaa
gtagtttgtttgctaggcatgaatgatggcgactacccaagaacgtcactaccgctggat
tttgatttaatcgccaaatacccaagacgaggcgatcgtagccgtcgaactgatgatcgc
tatctatttttagaagctattttgtctacacaatatcagctatatatcagttatatcggg
cgagatatgaaagataatagcgaacgttacccttcagtactggttgatgagctctgggaa
tatattgttcaatattatggtgaaccaaccaaaaatttagaaaaaaatgtcaattcttta
aaagtattacataccagaacgccatttaatcctgtaaattttttacaagagccgaaaagt
tatgctgatgagtggttacctgcagccctgaaaaaaggagaaagccaaagatttattagt
caaatacctgctataagtgttgattatattaatcttgatgagttaaaacgattctttcag
cactctattcggttatttttacaaaaacgatttaatttttatgtcagttaccttgatgat
actttacctgatgccgaaaactttaatcttgatagcttaaaacgttatcaacttaatgtg
caaattttaaatcatttaattactcaaaccgcccaagattcagaggttctttatcaacaa
ttaagattaacgggtgaattacctgatggcgcttttggtgagatcatttatgatgagcaa
actgaagcaatgcaatctttagcagataaaatccgtcaagaacggttagagatgaccagc
gaggaagtcaatttaacaattgaggcaaataagcaatattacccacttcaggggtggtta
acacatatacaagccgatggtattttaacttggcgtccatcaaaactctcaattcgtgat
ggcatctcattatggatagatcatttggtttattgtattttatatcctgagaaagttgat
aaccaaagtcgcatttatggtcgtgatgagcaagaatggcgattttcgcatttagaagct
aacgaggcattaacttacttaacctcattagttgaaggatttttgcaaggcatcaatcaa
cccttattaatgccaattcaaagtgcatggagttggttaacgtcggcttataataaaaaa
actggtgaaatcgttgctagtgatagggctaaaagtcagcttattaatacttggcaagga
ggccttttccaatcaccagagatcgacagttactatgaacgtttgtatcctgaattaacc
gatgaactaatagaacagatcatctattttgctaagcaatttctattgccaatcttatta
aatcaagtaacagtagaatag
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