Gilliamella apicola: GAPWK_0104
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Entry
GAPWK_0104 CDS
T03066
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
gap
Gilliamella apicola
Pathway
gap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GAPWK_0104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gap03400
]
GAPWK_0104
Enzymes [BR:
gap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GAPWK_0104
DNA repair and recombination proteins [BR:
gap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GAPWK_0104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
AHN24683
LinkDB
All DBs
Position
115337..116686
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AA seq
449 aa
AA seq
DB search
MQHNSSILSVKDLNQMVKDLLADAIGQIWLMGEISNFSRPASGHWYFTLKDDTAQVRCAM
FRNSNFRAGFTPQNGQQVLVRATVTLYEARGEYQLVIDKIQPAGAGLLQQKFEQLKQKLF
EEGLFESIYKQSLPENIRTVGIITSSTGAALHDICQILKRRDPSLHLIIYPTQVQGTEAA
AQIAKMIQIANARQECDVLIVGRGGGSLEDLWSFNEEVVARAIFASQLPVVSAVGHEIDF
TIADFVADVRAATPSAAAELVSRDCLEQIRRIQVQEQHLSMAMDYYLTRRREMLNKWRHQ
LQTQHPQAKLAKKLNRLLSYQHALYENMQQYLLKQSNRHNFLDKQLLRLSPQNNITYLSQ
IIYQKRQQLVNFIQQKITESRHQFVLQTSKLNSVSPLATLERGYSVTTDQQNMVVRRVEQ
VNVGEVITTRLANGELISQIIDIQDKYHH
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcagcataatagttcgattctatcggttaaagatcttaatcaaatggtgaaagatctt
cttgctgatgctattggtcaaatttggctgatgggtgaaatttctaatttttctcgccca
gcttctgggcattggtatttcaccttaaaagatgatacagctcaagttcgttgtgccatg
tttcgcaatagtaattttcgtgctggatttacaccacaaaatggtcaacaggtattggtt
agagcaactgtgactctttatgaagcacgaggtgaatatcaacttgttattgataaaatc
caacctgctggcgcaggattattgcaacaaaagtttgaacaattaaaacaaaaattattt
gaagaaggtttatttgaatctatttataaacaatcattgcctgaaaatattcgtactgtt
ggcattattacttcttcaactggggcagcattacatgatatttgtcagatcttaaaacga
cgtgatccaagtttgcacttaattatctatcccacgcaagtacaaggcacagaagctgct
gcacagatcgctaaaatgattcaaattgccaacgctcgtcaagaatgtgatgtgttaatt
gttggtcgaggtggtggctcactcgaagatttatggtcatttaatgaggaagtggtcgca
agagcgatttttgctagccaattaccagttgtcagtgcagtgggacatgaaatagatttt
accatagccgattttgttgctgatgtcagagcggctactccatccgcagcagcagaatta
gttagtcgcgattgtttagaacagattagacggattcaagttcaagaacagcatttatct
atggcaatggattattatttaactcgacgtcgtgaaatgctcaataagtggcgtcaccaa
ttgcagactcaacatcctcaagccaaactagcaaaaaagttaaatcgattactttcttac
cagcatgctttatatgaaaatatgcagcaatatttactcaaacagtcaaatcgtcataat
tttttagataaacaattgttacgactatcacctcaaaataatattacctacttaagtcaa
ataatttaccaaaaacgtcagcaacttgttaattttattcagcaaaaaataactgagtca
cgacatcaatttgttttacaaacctcgaaactcaatagtgtcagtccacttgcgacatta
gaaagaggatactctgtaacaaccgatcaacaaaatatggtggtgcgtcgtgttgaacaa
gtaaacgtaggcgaggttataacaaccagattagctaatggtgaattaattagtcaaatt
attgatatacaagataaatatcatcattaa
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