Gilliamella apicola: GAPWK_0263
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Entry
GAPWK_0263 CDS
T03066
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gap
Gilliamella apicola
Pathway
gap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GAPWK_0263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gap03021
]
GAPWK_0263
03019 Messenger RNA biogenesis [BR:
gap03019
]
GAPWK_0263
Transcription machinery [BR:
gap03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GAPWK_0263
Messenger RNA biogenesis [BR:
gap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GAPWK_0263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA_25
AAA
FtsK_SpoIIIE
S1CSD-TOTE-2
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
AHN24840
UniProt:
X2GX20
LinkDB
All DBs
Position
275760..277022
Genome browser
AA seq
420 aa
AA seq
DB search
MNLTELKNTSVSELVALGEKTMGLENLARLRKQDIIFAILKQHAKSGEDIFGDGVLEILQ
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKEGERYFALLKVNEV
NHDKPEDARNKILFENLTPLHPNSRLRMERGNGSTEDITARVLDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSLAVNHPECELVVLMIDERPEEVTEMQRLVKGEVVASTFDEPAARH
VQVAEMVIERAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMEVHLSRKIAERRVFPAID
FNRSGTRKEDLMTSPDELQKMWILRKILNPMGEIDAMEFLIDKLAMTKTNDEFFEMMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaactgaattaaaaaacacttctgtctccgagcttgtagcgcttggtgaaaaa
acaatgggtcttgaaaatcttgctcgtcttagaaaacaagacattatttttgcaatttta
aagcagcatgctaaaagcggtgaagatatttttggcgatggtgtgcttgaaattttgcaa
gatgggttcggttttttacgttctgccgatagctcatacttagcaggacctgacgatatt
tatgtatcaccaagccaaattaggcgatttaatttaagaacgggcgatacaattgctgga
aaaatcagaccgccaaaagagggcgaacgttattttgccttacttaaagttaacgaagtt
aatcatgataaacctgaagatgctcgcaataaaatcctctttgaaaacttaactccactt
catccaaactctagattacgcatggaacgcggcaatggttctaccgaagatattacagct
agagtacttgatttagcttcaccgattggtaaaggtcaacgtggtttgatcgttgcgcct
ccaaaagctggtaaaaccatgctactgcaaaacattgcacaaagtttggctgtgaatcat
cctgagtgtgaactcgtggtattgatgattgatgaacgaccagaagaagtcactgaaatg
caacgtttggtaaaaggtgaagtagttgcatcaacttttgatgagcctgctgcaaggcat
gttcaggttgctgaaatggttattgaacgcgctaaacgtttagtggaacataaaaaagat
gtcattattttactcgattcaattactcgtctagcacgcgcctataacacggttgttccg
tcatcaggtaaagtattaactggtggtgtagatgcaaatgcattacatcgaccaaaacgt
ttttttggtgcagcacgtaatgttgaagaaggtggtagtttaactattattgcaaccgca
ctgattgatactggctcaaaaatggatgaagtcatttacgaagagtttaaaggtacgggt
aatatggaggtacatttatctcgtaaaattgcagagcggcgtgtattccctgcaattgac
tttaatcgctctggtactcgtaaagaagatttaatgacttcaccagatgagttacaaaaa
atgtggattttgcgcaaaattcttaacccaatgggtgaaatcgacgcgatggaatttttg
attgataaacttgccatgactaaaacgaatgatgagttttttgaaatgatgaagcgttca
tga
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