Gilliamella apicola: GAPWK_0789
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Entry
GAPWK_0789 CDS
T03066
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
gap
Gilliamella apicola
Pathway
gap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GAPWK_0789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gap03400
]
GAPWK_0789
DNA repair and recombination proteins [BR:
gap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GAPWK_0789
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GAPWK_0789
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AHN25366
UniProt:
L0APN9
LinkDB
All DBs
Position
869979..871982
Genome browser
AA seq
667 aa
AA seq
DB search
MKKFKLCSEFKPAGDQPEAIKRINQNLDDGIAHQTLLGVTGSGKTFTMANVIAHHNRPTI
ILAPNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPESYVPSTDTFIEKDASINEHIEQ
MRLSATKSLLERRDVVIVASVSAIYGLGAPETYMSMILHLTKGTITDQRAILTRLAELQY
TRNEIGFSRGTFRVRGDVIDIFPADSDELAVRVELFDDEVDRIVMFDPLTGSAVNEVSRI
TIYPKTHYVTPRNIMDNAIAQIKQELKERQKILLDNNRLLEEQRLTQRTLFDIEMMTELG
YCSGIENYSRFLSQRNPGDPPATLFDYLPADGLLFIDESHVAIPQLGAMYNGDRSRKLNL
VEYGFRLPSALDNRPLKFSEFENIMPQTIYVSATPAKYEIEKSGGEIIEQVVRPTGLLDP
IIEVRPVATQVDDLLSEIKLRINNDERVLVTTLTKRMSENLTDYLSEHNVNVKYLHSDIN
TVERMEIIRDLRLGKVDVLVGINLLREGLDIPEVSLVAILDADREGFLRSESSLIQTVGR
AARNVNGKAILYADKITPAMQKTIDETARRRKKQQDFNTNHGITPKSVSKEIKDILDAGL
STKKATAKIQAFEPGKPYNYVSVKEVQARVKELEAMMYEAAQNLEFEKAGVLRDEIKKLR
ADFIKVS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattcaaattgtgttccgaattcaaacctgctggtgatcaaccagaagcaata
aaaaggattaatcaaaaccttgatgatggaattgcacatcaaacattattgggtgtaaca
ggatcgggtaaaacgttcactatggcgaacgtaattgctcatcacaatcgccctacaatt
attcttgcgccaaataaaacattggcagctcaattatacggtgaaatgaaggcttttttc
cctgaaaatgctgttgaatattttgtttcttattatgactattatcagcctgaatcttat
gtgccttcaactgatacatttattgaaaaagatgcatcaattaatgagcatattgaacaa
atgcgtttatcagcgaccaaatcattgcttgaacgtcgtgatgtcgtgattgttgcttct
gtgtctgctatttatggattaggtgcgcctgaaacctatatgtccatgatattgcatcta
actaaaggtacgattaccgatcaacgagcaatcctaacacgccttgctgaactacaatat
actcgcaatgaaattgggtttagtcgtggtacgtttcgggtgcgtggggatgtgatcgat
attttccctgctgattcagatgaacttgctgtgcgcgttgaactatttgatgatgaagtt
gatcgtattgtgatgttcgatccattaacagggagtgctgtgaatgaggtatcacgcatt
actatctatccaaaaactcactatgttacgccaagaaatattatggacaatgcgatagcg
caaattaagcaggagttaaaagagcgtcaaaagatactactagataacaatcgcctttta
gaagaacaacgattaacgcaacgtacactttttgatattgagatgatgacagaacttggt
tattgctcagggattgaaaattactcgcgttttctatcgcaacgtaatccaggcgatcca
ccggcaacattatttgattatttaccagcagatggattactgtttattgacgaatcgcat
gtggcaattccacagcttggtgccatgtacaatggtgaccgatcccgtaaactgaatctg
gttgagtatggatttcgtttaccatcggcgttagataatagacctttaaagttttctgaa
tttgaaaatattatgccgcaaacgatatacgtatcggctacaccagcgaaatatgaaatt
gaaaaatctgggggagaaatcattgagcaagtagtgaggccaacaggtttattggatcca
attatcgaagttagacctgttgcaacacaagtggatgatctcttatcagaaattaaactc
cgaattaataatgatgagcgagtgttagttactacattgaccaaacgaatgtcagaaaac
ttaacagattatttatcagagcataatgtgaatgttaaatatttacattcagatatcaat
actgttgaacgaatggaaataattcgtgatttacgtcttggtaaagtcgatgtattagtg
ggcattaacttattgcgtgaaggattagatattccagaagtttcactggttgccatttta
gatgctgatcgggaaggttttttgcgttcggaaagctcattgattcaaaccgttggccgg
gctgcgcgtaatgtgaatgggaaagcgatcttatatgctgataaaattacacccgcaatg
cagaaaacaatcgacgaaacggctcgtcgacgtaaaaaacagcaagattttaatactaat
catggcataacaccaaaatcagttagcaaagaaattaaagatattttggatgcaggattg
agcactaaaaaagcgacagctaaaatacaggcgtttgaaccaggtaaaccgtataattat
gtgtcggttaaagaagtacaagcgagagttaaagagcttgaagcaatgatgtacgaagct
gcacaaaatctcgagtttgaaaaagcgggtgtattacgtgacgagatcaaaaaattacgt
gcagattttattaaagtatcttag
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