| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:gap00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GAPWK_1627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:gap03019]
GAPWK_1627
03400 DNA repair and recombination proteins [BR:gap03400]
GAPWK_1627
Enzymes [BR:gap01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GAPWK_1627
Messenger RNA biogenesis [BR:gap03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GAPWK_1627
DNA repair and recombination proteins [BR:gap03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GAPWK_1627
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1778843..1780681)
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| AA seq |
612 aa
MSIKDQIEDVLHNIFGYKSFRNQQKEIIESIIDGRDTLTIIPTGGGKSLCYQIPAVLLPS
TALIISPLISLMKDQVDQLLANGIPAALLNATQSLAEQQEVVERYLNHSIKLLYISPERL
AVGSFISMIQSHPPSLIAIDEAHCISQWGHDFRPDYRQLGQLSSRFPNVPIVALTATADK
MTQTDIIHQLQLVDPLVVVRSFDRPNIRYTVVEKFNLTEQVVSFIETQKGNSGIIYCSSR
SKVEDMTTRLASRGFSVMAYHAGLSYSERQKAQEAFLKDNVQIIVATVAFGMGINKPNVR
FVVHADCPRTIEAYYQETGRAGRDGVPAEAILLFNKNDLNWYHQQIAEKADGVHKEIEQH
KIDAMESFAQSLTCRRIVLLNYFGEKRTEPCNNCDICLYPPEKYDGLVDAQKVLSCIYRV
EQRYGAQYIVNVLRGSARSQIKENGHDKLSVYGIGKEQSSNYWLSVIRQLIHLGYLIQNI
STSSSLPTLQLTQEARKILRGEIPLSLAKPRLEIVKKSRLNRYARSINMTAMLSFEERML
FNNLKRLRKDIADSEDVPPYIIFSDATLLEMVQTTPASKKELINVTGVGKIKLEKYGNLF
LEEIKDFIVKNI |
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| NT seq |
1839 nt +upstreamnt +downstreamnt
atgtcgataaaagatcagattgaagatgttttacacaatatatttggttataaatcattt
agaaatcaacaaaaagaaattattgaatcaattatcgatggacgagatacattaacaatt
attccaactggtggcggaaaatcgttatgctatcaaattccagcggtactattgccaagc
actgcgttaattatttctcctttaatctcattaatgaaagatcaggttgatcaactgctt
gctaatggtattcccgcggcgcttcttaatgctacccagtccttggcagaacagcaagag
gtagttgaaagatatttaaatcactcgataaaattactatatatctctcctgaaaggctt
gccgtaggttcatttatatcaatgattcaaagccatcctccttcacttatcgcgattgat
gaagctcactgcatatcacaatgggggcatgatttcagacctgattatcgacaactaggg
cagttgtcctctcgatttccgaacgttccgattgttgcgttaaccgccaccgccgataag
atgacacaaaccgatatcattcaccaacttcaattggtcgatcctttggttgttgttcgt
agttttgatcgtcccaacattcgatatacagttgttgaaaaatttaatttaacagaacaa
gtggtctcttttattgaaacgcaaaaagggaatagtgggataatttactgttctagccgt
tccaaagttgaagatatgacgactcgacttgccagtcgtggattttctgttatggcttat
catgcagggctttcttacagtgagcgtcaaaaagcgcaggaagcgtttttaaaagataat
gtgcaaatcattgtcgcgaccgtagcatttggtatgggtattaataaacctaatgttaga
tttgtggtacatgctgattgccctagaactattgaagcctattatcaagaaacgggcaga
gcggggcgagatggcgtgccagcagaagcaatcttgttgtttaataaaaatgatttgaat
tggtatcatcaacaaatcgctgaaaaagcggacggggtacacaaagagattgaacaacat
aaaattgatgctatggaatcatttgcacaaagtttaacttgtcgtcgtattgtattgctt
aactattttggcgagaaacgaactgagccttgtaataattgtgatatttgtctttatcca
cccgaaaaatatgatggtttagttgatgcacaaaaagttttatcttgtatttatcgagta
gaacagcgttatggtgcacaatacattgttaatgttttacgaggttctgctcgatctcaa
attaaagagaatggtcatgataaattgtctgtttatggtattggtaaagagcaatctagt
aattattggctaagtgtgattcgacagctaattcatttaggttatttgattcaaaatatt
tcaacttcttcaagtttgccaaccttacaattaactcaagaagctagaaaaatacttaga
ggtgaaattccattatcgctagccaaacctcgccttgaaattgttaagaaaagccgccta
aatcgttatgctcgatcaataaatatgacagcgatgttatcctttgaagagcgtatgtta
ttcaataatctgaaacgattacgtaaagatattgctgatagtgaagatgtaccaccttat
attatttttagcgatgcaacattattagaaatggtgcaaacaacgccagcaagtaaaaaa
gagctaattaatgttacgggagttggaaaaattaaattagaaaaatatggcaatctattt
ttagaggaaattaaagattttatagtaaagaatatataa |
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