Gilliamella apicola: GAPWK_1958
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Entry
GAPWK_1958 CDS
T03066
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gap
Gilliamella apicola
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gap03016
]
GAPWK_1958
Enzymes [BR:
gap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GAPWK_1958
Transfer RNA biogenesis [BR:
gap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GAPWK_1958
Prokaryotic type
GAPWK_1958
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AHN26531
LinkDB
All DBs
Position
complement(2169592..2170494)
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AA seq
300 aa
AA seq
DB search
MMNIKKTRRDLHGVLLLDKPQGLTSNDALQKVKRLFNAKKAGHTGALDPLATGMLPICFG
EATKFSQYLLDSDKCYRVIAKLGERTDTSDADGQIVSTKPVEVTESQINEALTHFRGDIL
QVPTMFSALKYQGKPLYEYARQGIVIDREARPITVYKNQLIQFDIKKNELTLEIHCSKGT
YIRTIVDDLGERLGCGAHVIYLRRLQVSNYPIENMVTLDALEEMNDKDQLLMPVDSPLQD
CPKVILTHAQGDDILLGRTIELDTSNAVETLVRIYQDEQFIGAGIQLFNKLSPKRLISTS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatataaaaaaaactcgccgtgatcttcacggcgttttattgctagataaacca
caaggcttgacgtcaaacgacgcgctacaaaaagtaaagcgattgtttaatgcgaaaaaa
gcagggcataccggagcgcttgatccattagcaacgggtatgttaccaatttgctttggt
gaagcgaccaaattttcgcaatatttgttagattctgataagtgctatcgtgtcattgct
aaacttggtgaacgaactgatacttctgatgctgatggtcaaatagttagcaccaaacca
gttgaggtaactgaatcgcaaatcaatgaagctttaacacattttcgtggtgatatttta
caagtgccaacgatgttttcagcgctaaagtatcaaggtaagccactttatgagtatgct
cgtcaaggtattgtaattgatcgcgaagctagacctatcactgtttataaaaatcaactt
attcaatttgatattaaaaaaaacgaattgacgttagaaatacattgttctaaaggaact
tatattcgcacgattgttgatgatctaggtgaacgacttggttgtggtgcacacgttatt
tatttaagacgtttgcaagtatccaactatcctattgaaaatatggttaccttagacgca
ttagaagagatgaacgataaagatcaactcttaatgcccgtagatagtccattacaagat
tgtcctaaagttatactgactcatgctcaaggtgatgatattttattgggtcgaacaatt
gaactcgatactagtaatgcagttgaaacattggtaagaatctatcaggatgaacaattt
attggagcaggaatacaattgtttaataaattatcgccaaaacgattaatatcaacttca
taa
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