Gilliamella apicola: GAPWK_1985
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Entry
GAPWK_1985 CDS
T03066
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
gap
Gilliamella apicola
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gap03016
]
GAPWK_1985
Enzymes [BR:
gap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GAPWK_1985
Transfer RNA biogenesis [BR:
gap03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GAPWK_1985
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GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AHN26558
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Position
2202200..2204140
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AA seq
646 aa
AA seq
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MFQNNPLLAQLKQELHQQTPRIEGTVRAHEKGFGFLDVDNKTSYFITANKMKTVCNGDKV
SGTVIENGDKKVFEPESLIESPLQRFIGKIGFQERSMVIYPENMPANLAIRCKINKQVQE
KLKEDDWVVATLISHPLEEGKNNFLAEITHFIAENSSIYLPWLKTLARYNLEDNSPQPDT
LTINEKELTDRQDLTDINFFTIDSEYTEDMDDAISVSKDEQGNYQLKVAIADPTAYILQD
SQLDKIAKKRSFTTYLPDFNIPMLPIELANDLCSLKENQKRPALVCDINIDANGIIDENS
ITFMPAFIESKAKLSYNNVSDFLENNDELLSNNATLPEQLNLLSSLAKTRTIWRQNNALV
FKDSNDYRFVLDENRHVKSINKEPRRIASQIVEEVMIIANQALTLQLNNKIGFGIFNTHS
GFDIKFIDQILKVLSNHGIEGFDKESLLSFDGYIKLRRIIDNDEFLTARLRKCQSPADFS
IQPQPHFGLGLNAYATWTSPIRKYGDMVNHRLIKNYLRSQPLNEPDKEQLKIMNERRKLL
RYAERDIAENLYIQYLSDKIGDSFVAEIVDINRGGARLRLTDIGAFVFLPLSMIHPVRDE
VVSSPEEGVIRINNDICYKLSDTLNIKIHQVKKESQSIIVKLVTDK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaataatccgctacttgcacaactaaagcaagaacttcatcaacaaacaccg
cgtattgaaggtaccgtccgagcccatgagaaaggatttggttttttagatgttgataat
aaaaccagttatttcattactgcaaataaaatgaaaaccgtatgcaatggcgataaagta
tctggaacagtaattgaaaatggtgataaaaaggtttttgaaccagaatcattaattgaa
agccccctacaaagatttataggaaaaataggttttcaagagcgatcaatggttatttat
cctgaaaacatgcctgctaatttagctattcgctgtaaaattaacaaacaggttcaagaa
aaacttaaagaagatgattgggtagttgctaccttgatttctcatcctcttgaagaaggt
aagaataattttctagcagaaatcacgcattttattgctgaaaatagttcaatttaccta
ccttggttaaaaactttagcccgatataatttagaagataattcaccacagccggacaca
ttaacaattaatgaaaaggaactgactgatcgtcaagatttaaccgatataaactttttt
accatcgatagtgaatatacagaagatatggatgatgccatttctgtttcaaaggacgag
caaggtaattatcaattaaaagtcgctattgcagatccaactgcgtatattttacaagac
agccaacttgataaaatagctaaaaaaagaagtttcacaacatatttacccgattttaat
attccaatgttacctattgaattagctaatgacctttgttctttaaaggaaaaccaaaaa
cggccagcattagtatgcgatattaatatcgatgcaaatggtataatagatgaaaatagt
atcacttttatgcctgcatttatcgaatcaaaagcgaaactttcttataataatgtttca
gattttttagaaaataatgatgaattgctatctaataacgcaacattacccgaacaactt
aacttattgtcatctttggcaaaaactagaaccatttggcgacaaaacaatgcgttagtt
ttcaaagatagcaatgattatcgttttgtgcttgatgaaaaccgtcatgtaaaatctatc
aataaggaacctcgtcggattgccagtcaaattgttgaggaagtgatgatcattgctaat
caagcattaactttgcaattaaataataaaatcggatttggtatattcaatactcattca
ggttttgacattaaatttattgatcaaattttgaaggtgttaagtaatcatggtattgaa
ggatttgataaagaatctttattatcttttgatgggtatatcaaattacgacgaattatc
gataatgatgagtttttaacagctcggctccgtaaatgtcaaagtcctgctgatttttct
attcaaccacaacctcattttggcttaggattaaatgcatatgcaacttggacatcacca
atacgcaaatatggggatatggttaatcatcgtttaattaaaaattatttacgttcacaa
cccttaaatgaaccagataaagagcagttaaaaatcatgaatgaaaggcgcaaattatta
cgttatgctgaacgtgatattgctgaaaatctttatattcaatatttatctgataaaatt
ggtgatagttttgttgctgaaattgtcgatatcaaccgcggaggtgctcgtctgcgttta
accgatattggtgcatttgtatttttaccactttcaatgattcacccagttcgagacgaa
gtagtttcaagtcccgaagaaggtgttattagaattaataatgatatctgttataaactt
tcagatacccttaatattaagatccatcaagttaaaaaagaaagtcaatcaataatagtt
aaattagttacagataaatga
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