Gilliamella apicola: GAPWK_2032
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Entry
GAPWK_2032 CDS
T03066
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
gap
Gilliamella apicola
Pathway
gap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GAPWK_2032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gap03400
]
GAPWK_2032
Enzymes [BR:
gap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GAPWK_2032
DNA repair and recombination proteins [BR:
gap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GAPWK_2032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
Biotin_carb_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AHN26605
LinkDB
All DBs
Position
complement(2265761..2269237)
Genome browser
AA seq
1158 aa
AA seq
DB search
MVSSSLVKKLNLFELPLTGRSLIEASAGTGKTYSLAFIYLRLLLGIGQNSYPKPLDVSQI
LVVTFTKAATQELRSRIRQNIQELRLGLLQGHHNDPIYQKLIELIDDRQSAVQRLTDAQQ
SMDEAAIYTIHSFCQRILTSHAFESGVLFEQKLVADEYQLQLRVVQDFWRHYFTPLDKSL
AYLIIDTWKDPATLLKDINPYLGLGVEDSNESEPDIRATIEAFYEKNYKKIEEIKQYWLA
ACADLAEIITQSGVSKQSYSSRNLPNWLNKVSTWANKATQTFELPDELEKFRQSVLNEKT
KDGKSAPCHSIFEKIESLYQQPLNLRSQILMDIVGVIQKGIYKEKLKNGAISFDDLIWQL
NRALHVKNGKRLAKSIASQYCVALIDEFQDTDPLQYQIFNRIYDSQQSDRGLLFIGDPKQ
AIYSFRGADIFTYLEAKRSTGENHYTMDVNHRSSATMVNAVNQLFANHDNPFVFDEIPFL
PMQVAERNQKKALLLNDQEVSALAAYLLPQEISTNADYQEYMASCCATQIVTLLSSSSIL
VDNQEKQRPVITADIAVLVRTGREAEIIRQKLAILGVKSVYLSNHSSVFSSTDAKEVLSL
LQAVLMPENESTLRLALMTSLFGHTMTELEQITDDQDKWESLVEEFKQYQAIWLHYGVLV
MLRRMMRRRHLAENILARQDGERTLTNIMHLGELLQEAADELDSPHALVRWLTKQIVSPD
LNLENHEQRLESDENLVKIITIHKSKGLEFPIVWLPFISLYRSSDSQFYHDKENNYKLTY
AWLLTDEIKQQIEDERLAEDLRLLYVAMTRSVYHCSIGLASLKKSQSAINHLLRNDLRAI
ANMANLIDVQLPINSQHYIPPVLLVPTLSANIFTRKMSNCWRVTSYTELQQHQNTVLNYN
LDIINDWDEPQFKSNSEDFIELQYDIHHFPKGAYVGTLMHSIMEYVSFDNIDKLCAEMVK
KLNLDSNWNDIVADWMRRVLATELNKPGLILSKILMGRCINELQFYLPIRQSVTCQQLDS
LCKKYDDLSQSRSELSFETVQGMLKGFIDLIFEFEGKYYVVDYKSNWLGDNIDCYGQNAL
KKVMIEHRYDLQYQLYSLALHRFLRSRISNYQYETHFGGVYYLFLRGMPDHGIFYHRPQQ
EFIEKLDQLFDGDKTSTL
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggtttcatcaagcttagtaaaaaaacttaatctttttgaattacctttaactggtcga
agtttaattgaggcatcggcaggaacgggtaaaacctattcactcgcctttatttattta
aggttattacttggtattggtcaaaatagttatccaaagccacttgatgttagccaaatt
cttgttgtaactttcactaaagcggctacgcaagaattacgttcacgtattcgtcaaaat
attcaagaattaagacttggtttacttcaaggacaccataacgatcctatttatcaaaaa
ttaattgagttaattgatgatcgtcagtcagctgtgcaaagacttactgatgcacaacag
tccatggatgaagcggcgatctatactattcatagtttttgccaacgtatattaaccagc
catgcttttgaatctggagtattatttgaacaaaagctagtagctgatgaatatcaattg
caattgcgtgtagtacaagacttttggcgtcattatttcacgccattagataaatcgctt
gcttatcttattattgatacttggaaagatcctgccacattattgaaagatattaaccct
tatttgggattaggtgttgaggatagtaatgaatcagagcctgacattagagcaacgatt
gaagctttttatgaaaagaattataaaaaaatagaagagattaaacaatattggttggct
gcttgtgctgatttggctgaaattattactcaatctggcgtaagcaaacaatcttatagc
agccgaaatttacccaattggttgaacaaagtgtctacatgggcaaataaagcaacacag
acctttgaattacccgatgaacttgaaaagtttcgtcaatctgtattaaacgaaaaaacc
aaagatgggaaaagtgctccttgtcactccattttcgaaaaaatcgagtcactttatcaa
caaccacttaatttacgtagtcaaattttaatggatattgttggtgttatacaaaaaggg
atttataaggaaaaactaaaaaatggtgctataagttttgatgatcttatttggcaactt
aatcgtgctctgcatgtaaaaaatggtaaacggctggcgaaaagtattgcctcgcaatat
tgtgttgccttaatcgatgagttccaagataccgatccattacagtatcagatatttaat
cgtatttacgatagccagcagtccgatcgtggattgttatttattggtgatccaaagcaa
gctatatatagttttcgtggtgcagatatcttcacttatttggaagctaaacgatcgacg
ggcgaaaatcattatacaatggatgtaaatcatcgttcttctgcaacaatggtgaatgcg
gttaatcagctatttgctaatcatgataacccatttgtgtttgatgagattcctttttta
ccaatgcaggtagcagaaagaaatcaaaaaaaagcattgttgttaaatgatcaagaagtc
tccgcattagcagcttatttattaccgcaggaaatttcaacaaatgctgattatcaagaa
tatatggcaagttgttgtgcaacgcagattgtgactttattgtcgagttcttcaatatta
gtggataatcaagaaaaacaacgtccggtaataacggcagatattgctgttttagtgcgt
acaggacgtgaagctgaaatcattagacaaaaattagcaatattaggcgttaaaagtgtt
tacttatcaaatcatagtagtgttttttcatcaacggatgcaaaagaagtacttagccta
ttgcaagcagtgttaatgcctgagaacgaatcaacactgcggttagccctaatgacatca
ctgtttggtcatacaatgactgaacttgagcaaattactgatgaccaagataagtgggaa
agtttggtagaagagtttaaacaataccaagctatttggctacattatggcgttttagtc
atgttacgcagaatgatgagacgacgtcatttagctgaaaatatcttagcacgtcaagat
ggtgaacgaactttaaccaatataatgcatctaggagaattacttcaagaagccgcggat
gaattagacagtcctcatgctttagttcgttggttgaccaaacaaatagtgagtccagat
cttaatttagaaaatcacgaacaacgccttgagagtgatgaaaacttagttaaaattatt
acaatccataagtcaaaagggttagagtttcctattgtttggttgccttttatctcattg
tatcgatcatctgacagtcaattttatcatgataaagagaataactataagttaacttat
gcatggttattgacagatgaaattaagcaacaaatagaagatgaacgtcttgctgaggat
ttacgtttattatatgtggctatgacgcgctcggtatatcattgcagtatcggtctcgct
tctttgaaaaaaagccagtcggcaattaatcatcttttaagaaatgatttaagggctatt
gcgaatatggcaaacttaattgatgtccaattgccaattaatagtcaacactatattcct
cctgttttattagttccaacactatcggctaacatttttacacgcaagatgtcaaattgt
tggcgagtaaccagctatactgaattacagcaacatcagaatacggtattaaattataat
cttgatatcatcaatgattgggatgaaccgcaatttaaatccaatagtgaagattttatc
gaattgcaatatgacattcatcattttcctaaaggggcatatgttggtactttaatgcac
agcataatggaatatgtctcattcgataatattgataaattatgtgcagaaatggtgaaa
aagctcaatcttgattctaattggaatgacattgtcgctgattggatgagacgagtattg
gcgactgaactaaataaaccaggattaatcttatcaaaaatattaatgggtagatgtatt
aacgagttacaattttatttacctatacgccaatctgtaacttgccaacaattagattct
ttgtgtaaaaaatatgatgatttatctcaatcacgttcagaattatcctttgagactgtg
caaggtatgttaaaagggtttattgatttaatctttgaatttgaaggaaaatattatgtg
gtcgattataagtcaaattggttaggtgataatattgactgttatgggcaaaatgcactg
aaaaaagtgatgatagaacatcgttatgatctgcaatatcagctttatagtttggcatta
catcgatttttgagaagtagaatatctaattatcaatatgagactcattttggtggagtg
tattatctctttttacgtggaatgcctgatcatggcattttttatcatcgacctcagcaa
gaatttattgaaaaactcgatcaattatttgatggcgacaaaacatcaaccctttaa
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