Gilliamella apicola: GAPWK_2432
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Entry
GAPWK_2432 CDS
T03066
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gap
Gilliamella apicola
Pathway
gap03030
DNA replication
gap03430
Mismatch repair
gap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GAPWK_2432
03430 Mismatch repair
GAPWK_2432
03440 Homologous recombination
GAPWK_2432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gap03032
]
GAPWK_2432
03400 DNA repair and recombination proteins [BR:
gap03400
]
GAPWK_2432
Enzymes [BR:
gap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GAPWK_2432
DNA replication proteins [BR:
gap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GAPWK_2432
DNA repair and recombination proteins [BR:
gap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GAPWK_2432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AHN27005
LinkDB
All DBs
Position
complement(2730667..2734149)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPKFIHLHLHSDFSMIDGIAKVSTLVSEVSKLQMPAFAITDFTNLCGLVKFYGSAMSK
GIKPIIGADLVIKNPQLSDDIYQLTLLAATNEGYQNLTLLISKAYQRGYIGDMPVVDQQW
LVEHKAGLIVLAGRESDIGVGITRNNQVIVDNGINFYSENFPNHFYFELVRTGRTNEELF
IHTAVKLAEQHQLPVVATNDVRFLRSSDFEAHEIRVAIHDGNTLEDPNRPKNYSSQQYLR
SEQEMCDLFLDIPEALANSVEIAKRCNVTIRLGEYFLPKFPTGDMSTEDFLVHKSRMGLE
ERLEFLFPDPEIRKQRRSEYDERLETELNVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLAFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIGHVADM
YGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPLDPGMTLAKAFEVEPQL
QDLYDNNEEIKSLIDIARQLEGVTRNAGKHAGGVVISPTKITDFAPIYCDPEGNHPVTQF
DKNDVEYAGLVKFDFLGLRTLTIINWAIKMINERQLRNGQPLVDINRIELDDKDSFELLL
KAETTAVFQLESRGMKDLIRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREDV
SYPDIKYQHESLKPILDPTYGIILYQEQVMQIAQTLSGYTLGGADLLRRAMGKKKPEEMA
KQRFVFKEGAEKQGVDGELAMRIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAE
FMAAVMTADMDNTDKIVGLVDECLRMGLKVNPPDINSGLYHFHVNDKGEIVYGIGAIKGV
GEGPIEAIVEARNSGGYFKNIFELCARTDMKKINRRILEKLTMAGAFDKLGPHRAAILHS
INDAMQAADQYAKAQDIGQEDMFGVLAEEPEQVEYAYASVPELPAQVLLDGEREALGLYL
TGHPVTQYLKELNRYSGGLRISEASPTGWGKLATFAGIVTEARVRVTKKGNKIGLFTLDD
RSGRIDGMLFADSLEKFGHLLVKDKILIVSGQVSHDDFNGGLKMSVRDIVDLKDARAKYV
KGLAVTLTEIEANRSILLRLQQIFEPYRHGSVPVNLYYHRDDSVVRIQFGTTWRIVPEDA
LIVELKTLLGNDRIEFEFDK
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacccaaatttattcatcttcatttacatagcgatttttccatgattgatgga
attgctaaagtgagtacattagttagtgaagtgagcaaattacagatgccagcttttgcg
atcactgattttacaaatctttgcggactggttaaattttatggttctgcaatgtccaaa
ggaattaaacctattattggtgccgatttagttattaaaaatcctcaattatcagatgat
atttatcagttaacattattagctgcaactaatgagggatatcaaaatcttactttatta
atttctaaagcttatcagcgaggttatatcggcgatatgcctgttgtggatcaacaatgg
ttggttgagcataaagctggattaattgttttagctggaagagaaagtgatattggtgtt
ggcattactcgtaataatcaagtaatagttgataatggaattaatttttattctgaaaat
tttcctaatcatttttattttgaactggtacgaactggtcgtactaatgaagaattattc
attcatactgccgtgaaacttgccgaacaacatcaattacctgttgttgcaaccaatgat
gttagatttttaagatcctcagattttgaagctcatgaaattcgtgtagccattcatgat
ggcaatacacttgaagatcctaatcgccctaaaaactactcgtctcaacagtatcttcgt
agtgaacaagagatgtgtgacctatttttggatattccagaagccttggcaaatagtgtt
gaaatagcaaaacgatgtaatgttacaattcgacttggtgaatactttttacctaaattt
ccaactggagatatgtcaactgaagactttttagtccataagtcacgaatgggtttagaa
gaaagacttgaatttctatttcccgatcctgaaataagaaaacaaagaagatcggaatat
gatgaacgcttagaaacagaattaaatgtcattaatcagatggggtttcctggttacttt
ctgatagttatggagtttattcaatggtcaaaagataatgatattcctgttggacctgga
cgaggttcaggtgcgggctctctcgttgcttatgctttaaaaattactgatttagatccg
ttagcgtttgatttgctatttgaacgtttcttaaatcctgaacgtgtttcaatgcctgac
tttgatgttgacttttgtatggaaaaacgcgatctggttatcggtcatgttgctgatatg
tatggacgtgatgctgtttcacagattattacttttggtacgatggctgcgaaagcggta
atacgtgatgttggtcgagtacttggacacccttatggatttgttgatcgtatttctaag
ttaattccgcttgatccaggtatgacactggcaaaagcttttgaagttgaacctcagctt
caagatttatatgataataatgaagagattaaatcattaattgacattgcacgtcaatta
gaaggggtcacacgaaatgcgggtaaacatgctggtggggtcgtgatttcacctactaaa
attacggatttcgcaccaatttattgtgatccagaaggaaatcatccagtaacgcagttt
gataaaaatgatgttgaatatgctggactagtaaaatttgactttttaggtctacgaaca
ttaaccattattaattgggcaattaaaatgattaatgagcgtcagttgagaaacggacaa
ccactagttgatatcaatcgcatagaacttgatgataaagattcttttgaactgttgtta
aaagccgaaacaacagctgtattccagctggaatctagaggaatgaaagatttaattcgg
cgtttaaaaccagactgttttgaggatatgatagcgttagtggcactttttcgccctggt
ccattacaatctggcatggtagataattttatcgatcgtaaacacggtcgagaagatgtt
tcttatcccgatataaaataccaacatgagtcattaaaaccaatattggatccaacctat
ggtattattttatatcaagaacaagttatgcagatcgcccaaaccttatctggttacacg
ttaggcggagcagatttattgcgtcgagctatgggtaagaaaaaacctgaagaaatggca
aaacagcggttcgtctttaaagaaggtgcagaaaaacaaggtgttgatggcgaacttgcg
atgcgtatattcgatttagttgaaaagtttgctggttatggatttaataaatctcattct
gctgcttatgcacttgtttcttatcaaacattgtggttaaaaacacactatcccgctgaa
tttatggcagcagtgatgactgctgatatggataatactgacaaaattgttggtttagtt
gatgaatgtttaagaatgggattaaaagttaatcctcctgatattaatagtggtctctat
cattttcatgtgaatgataaaggggagattgtttatggtattggcgctataaagggggtt
ggtgaaggcccaattgaggctattgttgaggctcgtaacagtggtggatatttcaaaaat
atctttgaactttgcgctagaacagacatgaagaaaattaatcgtcggatacttgaaaaa
ctgactatggctggagcttttgacaaattaggaccacatcgagcggcgattttacatagt
attaatgatgcgatgcaagctgcagatcaatatgccaaagcccaagatatcggtcaagaa
gatatgtttggtgttttagccgaagagcctgagcaagttgaatatgcatatgcctcagtt
cccgaattacctgctcaagtgttgttagatggtgagcgagaagcattaggattatattta
actggtcatccagtaactcaatatttaaaagaattgaatcgttattctggcgggttaaga
ataagtgaagcttctcctaccggttggggaaaactagcaacctttgcaggtatagttact
gaggctagagttagggtgactaaaaagggtaataagattggtttatttaccttagatgat
cgttcaggtcgtattgatggcatgctgtttgctgattctttggaaaaatttgggcatcta
ctcgtgaaagataaaattctcattgtgtcaggacaagttagtcacgatgattttaatggt
ggactcaaaatgtcagtacgagatattgtagatttaaaagatgctcgagcaaaatatgta
aaaggtcttgctgtcacattaactgaaattgaagctaatcgctcaatattactacgattg
caacaaatttttgagccttatcgccatggaagtgtacctgttaatttatattatcatcgc
gacgattctgtagttcgtatccaatttggtactacatggcgaatagtacctgaagatgcc
ttaattgtagaattaaaaacattacttggtaatgatcgcattgaatttgagtttgataaa
taa
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