Gilliamella apis: RAM11_00960
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Entry
RAM11_00960 CDS
T09380
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gaq
Gilliamella apis
Pathway
gaq03030
DNA replication
gaq03410
Base excision repair
gaq03420
Nucleotide excision repair
gaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAM11_00960 (polA)
03410 Base excision repair
RAM11_00960 (polA)
03420 Nucleotide excision repair
RAM11_00960 (polA)
03440 Homologous recombination
RAM11_00960 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaq03032
]
RAM11_00960 (polA)
03400 DNA repair and recombination proteins [BR:
gaq03400
]
RAM11_00960 (polA)
Enzymes [BR:
gaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAM11_00960 (polA)
DNA replication proteins [BR:
gaq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RAM11_00960 (polA)
DNA repair and recombination proteins [BR:
gaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RAM11_00960 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RAM11_00960 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WLT06727
LinkDB
All DBs
Position
complement(198154..200928)
Genome browser
AA seq
924 aa
AA seq
DB search
MPNNEPIILIDGSSYLYRAFFACPPLTNANGEPTGAIFGVINMIRSLMNQYNPTHIAVVF
DAKGGSFRNEIYSEYKATREEMPENLRPQIEPIHTILKAMGLPLLCVEGVEADDVIGTLA
KQAEKENLQVLISTGDKDMAQLVSDKVTLINTMNNTALDPQGVMDKFGVPPEKIIDYLAL
RGDNSDNIPGVAGIGEKTAQALLTAFDSVKDIYNHLDDIEKLSIRGAKSLKQKLIDNQKD
AELSYLLATIKTDVALDFTNEQLLVTELDVNKLVELFAYYGFHRWQKELIAGNFLKQQKL
TVTDIDNLSLFSQESDTVKDKIDTDYQCILTHEQLDDWVSKLANCQQFAFDTETDNVDHI
HAKLVGISLSVAPYQAAYIPINHQYLGVPDQLPLDDVLTKLKPILENPAIKKIAQNAKFD
YSVLANYGIHVQGIAYDTMLESYVLNSTERHDMDSMANRYLHLKTITYNDLTKVDKKQVT
IDAIEVEKTTQYAAEDADVTLQLHQKLWPELEKDQKLSKLFTDIEMPLAIVLADMERTGV
LIDARQLNDYSIELNKKMLEIEAELHFLAGEKFNPSSPKQIQAILFDKHQLPVLKKTPKG
DPSTSEDVLSELAEQYVLPRKILFYRSLAKLKNTYTDKLPLMVSPIDHRIHTNYNQIGTV
TGRLSSNDPNLQNIPVRNEEGRRIRQAFIAPQGYKIISADYSQIELRIMAHLSQDQSLLS
AFADDKDIHRVTASEVLSKPEADVTAEERRRAKAVNFGLIYGMSAFGLSKQINLPRKEAQ
FYIDRYFERYPGVQAYMEETRQLATQQGYVETLSGRRLYLPKIISGNGIEKRGAERAAIN
APMQGTAADIIKTAMIKMSEWIKNQPTGNIRMVMQVHDELVFEVKEELVSEYSALIKSIM
ENCYQLSVPLKVDVGIGNNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgccaaataatgagccaattattttaattgatggatcttcttatctttatcgggctttt
tttgcttgtccacctttaaccaatgccaatggtgaaccaactggggctatatttggtgtt
attaatatgattcgtagcttgatgaatcaatataatcctacccatatagcggtagttttt
gatgctaaaggtggatcatttcgtaatgaaatttatagtgaatataaagcaactcgtgaa
gagatgccggaaaatttacgaccacaaattgaacccattcacaccattttaaaagcgatg
ggtttaccattactttgcgttgaaggtgttgaagctgatgatgtgatcgggactttagcc
aaacaagcagaaaaagaaaatcttcaagtactcattagtactggggataaagatatggcg
caattagtcagcgataaagttacactgattaataccatgaataatacggcgcttgatccg
caaggtgttatggataaatttggtgtgccaccagaaaaaattatagattatttagcatta
agaggtgacaattccgataatatccctggagttgcaggaattggagaaaaaacagcacag
gctttattaactgcttttgatagtgtaaaagatatttataaccatttagacgatattgag
aaattatcgattcgaggcgctaaatcattaaagcaaaaattaatagacaatcaaaaggat
gcagagctttcttatctattagctaccattaaaaccgatgtggcattagattttacgaat
gaacaactacttgttacagagcttgatgtaaataaattagtcgaattatttgcttattat
ggctttcatcgttggcaaaaagaattaatagcgggtaattttttaaaacaacaaaaacta
acggttactgacattgataatctgtcgttattttcgcaggaaagcgataccgttaaagat
aagattgatacagattaccaatgcatattaactcatgagcaattagatgattgggtcagt
aaattagctaactgtcagcagtttgcctttgatacagaaacggataatgttgatcatatt
catgctaaattggttggaatatcgctaagcgtggcaccttatcaagctgcttatattcca
attaatcaccaatatctcggtgtaccagatcaattaccattagatgatgtattaactaaa
ttaaaaccaatattagaaaacccagcaattaagaaaatcgcccaaaatgctaaatttgat
tacagtgtgttggctaattatggtatccatgtgcaaggtattgcttatgatacaatgctg
gagtcatatgtcttaaatagtactgaacgacacgatatggatagtatggcgaatcgttat
ttgcatctaaaaactattacctataatgatttaaccaaggttgataaaaaacaagtcact
atcgatgctattgaagttgaaaaaactacgcaatatgccgctgaagatgcggatgttact
ttgcaacttcatcagaaactatggcctgagctggaaaaagaccaaaagctcagtaagtta
tttaccgatattgaaatgccgttggcgattgtgttggccgatatggaaaggacaggggtg
ttaattgacgctagacagttaaatgattattccattgaattaaataaaaaaatgctagaa
atagaggccgaattacatttcctagcaggtgaaaaatttaatccttcttcaccaaaacag
attcaagctattttatttgataaacaccaattacctgtcttaaaaaagacaccaaaaggc
gatccatcaactagtgaagatgtattgagtgaacttgctgagcagtatgttttaccgcgt
aaaatattgttttatcgtagcttagcaaaactgaaaaacacttatactgataaattaccg
ctgatggtaagtccaatagaccatcgaattcataccaattacaatcaaattggtacggta
accgggcggttgtcatcaaatgatccgaatttacaaaatatccctgtacgtaatgaagaa
ggacgtagaattcggcaagcatttattgcaccacaaggttataagattatttcagccgat
tattcgcaaatagagttgcgcattatggcgcatttatcacaggatcaaagtctgcttagc
gcttttgctgatgataaagatattcatagggttaccgcgagtgaagtattaagtaaacca
gaggcagatgttacagccgaagagagacgacgtgcgaaagcagtcaattttggtttgatt
tatggtatgagtgcatttggattatcgaaacaaattaatcttccccgtaaagaagcacaa
ttctatattgatcgctattttgaacgttatcctggtgtacaagcttatatggaagaaaca
cgccaattggcaacgcaacaaggctatgtggaaactttatcaggaagacgattatattta
ccaaaaatcatttctggcaatggtattgaaaaacggggcgctgaacgtgcggcaattaat
gcaccaatgcaaggtactgcagcagatatcatcaaaaccgctatgattaaaatgagtgag
tggataaaaaatcaaccgacaggtaatatcagaatggtgatgcaagtacacgatgagctg
gtgtttgaagttaaagaagagttggtgagtgaatatagtgcgttgattaaatcaattatg
gagaattgttatcaactttcagtaccgttaaaagttgatgttggtattggtaataattgg
gatgaagcgcattaa
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