Gilliamella apis: RAM11_05170
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Entry
RAM11_05170 CDS
T09380
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gaq
Gilliamella apis
Pathway
gaq03420
Nucleotide excision repair
gaq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RAM11_05170 (uvrD)
03430 Mismatch repair
RAM11_05170 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaq03400
]
RAM11_05170 (uvrD)
Enzymes [BR:
gaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RAM11_05170 (uvrD)
DNA repair and recombination proteins [BR:
gaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RAM11_05170 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RAM11_05170 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ADDB_N
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
WLT07518
LinkDB
All DBs
Position
1115164..1117395
Genome browser
AA seq
743 aa
AA seq
DB search
MENKQSLLTDLNTEQKNAVTTDSQYTIVLAGAGSGKTRVLVHRIAWLCVEKNYSPNSIFA
VTFTNKAAAEMQERIQALVGEGYLNGMWVGTFHGLTHRLLRMFSQQAKLPENFQLIDSED
QIRLIKRIFRELKIDEKQWSPKECANFISTQKEKGLRADNLKPEDPKQVMWQTIYRDYQA
ICDRVGYVDFSELILRAYELLCSNENVLNYCRHRFSNILIDEFQDTNKIQYWLVKKLAGD
TANVMIVGDDDQSIYSWRGANADNLQMFINDYPETEIIRLEQNYRSTGIILDTANKLIAN
NQNRLGKNLWTDSGDGEKISLYVGFNDIDEARFVVGQIKKYHDDGHNYASCAILYRNNVQ
SRIFEDTLLQAGVPYQIYGSIRFYERQEVKLALAYLRLLHDHDNDMAFETTVNTPTRGIG
NVTLDKVRLCAKQNNISLWNACLMLIQKNALTERQRSGISRFLELMESIHVEVNELPFYK
QLDAIIKLSGVLQMYEQEPGIKGQARLDNLEELVSSAEQFFRVNQDNVIQDNETGKTLTV
LESFLAFTSLESRDVVNQQDSVQLMTLHSAKGLEFDNVFIVGLEEGIFPAQRSSQERDKM
EEERRLAYVGITRARKFLTLSLSELRRLYGREERNLPSRFLAELPVDNLQEISYRANLTS
FNNNDDDTFTKDEQFYQDRKKSYIKKKKESDGYTLGRKVKHNRFGEGTIVNLDGEGEHRR
VQIAFVNEGVKWLVVKLANLTLM
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaacagtcgttattaaccgacttaaacacagaacaaaaaaatgctgttaca
actgatagtcaatatactattgttcttgctggtgcgggaagtggtaaaacacgtgtatta
gttcatagaattgcttggttgtgtgttgaaaaaaattattctcctaactctatttttgct
gtcacctttaccaataaagcggctgctgaaatgcaagagcgaatacaagctttagtcgga
gaaggatacctaaatggtatgtgggtaggaacttttcatggtttaacccaccgtttattg
cgtatgttttctcaacaagccaaattacccgaaaattttcaacttattgatagtgaagat
cagatccgtcttattaaacgaatttttcgtgaactgaaaattgatgaaaagcaatggtca
cccaaagagtgtgctaattttatttccacacaaaaagaaaaagggcttagagcagataat
ctaaaaccagaagatccgaaacaagtaatgtggcaaacaatttatcgtgattatcaagca
atttgcgacagggttggttatgttgatttttctgaattaattttgagagcatatgagttg
ctttgtagtaatgaaaatgttttaaattattgtcgccatcgtttttcaaatatattaata
gatgaatttcaagatactaataaaatccaatattggctggtgaaaaaattagctggagat
accgcaaatgtaatgattgttggtgatgatgatcagtcaatttatagttggcgtggagct
aatgctgataatttacaaatgtttatcaatgattatccagaaactgaaattattcgccta
gagcaaaactatcgatcgacaggcattattttagatactgcaaataaattgattgctaac
aaccaaaatcggttaggtaaaaatttatggaccgacagtggtgacggagaaaaaatttca
ctatatgtcggtttcaacgatattgatgaagcaagatttgttgtaggccaaatcaaaaaa
tatcatgacgatggtcataattatgccagctgtgccattttatatcgtaataatgtgcaa
tcacgtatttttgaagataccttattacaagctggcgtaccttaccaaatttatggttcg
ataagattttatgaaaggcaagaggttaaattagctttagcctatctccgattattgcat
gaccatgataatgatatggcatttgaaactacggtaaatactccaactcgtggaataggt
aatgtcactttagataaagttagattatgtgctaagcagaataatatttcgttatggaat
gcatgtttaatgctgatccaaaaaaatgctttaactgaaaggcaacgctcaggtattagt
cgttttttagaattaatggaatctattcatgtcgaagttaatgaattaccattttataaa
caactagatgcaattattaaattatctggcgtattgcaaatgtatgaacaagaaccaggc
atcaaaggacaagctcgattggataatctagaggagcttgtttcatctgcagagcaattt
tttagagttaaccaagataatgtaattcaagacaatgaaacaggcaaaaccttaactgtt
ttagaatcatttttagcatttacctctcttgaaagccgtgacgtagtaaatcaacaagat
tcggtgcaattaatgactttacattcagcaaaaggattagaatttgacaatgtttttatt
gttggattggaagagggtatttttccggcacaacgttcctctcaagaacgagacaaaatg
gaagaagaaagacgcttagcttatgtcggtattacccgagcacgtaagtttttaacgctc
tctttgtctgaactaaggcggctttatgggcgtgaagagcgtaatttgccatcacgtttt
ttagcagaattaccagttgataatttacaagaaatcagttaccgagctaatttaacatca
tttaataataatgatgatgatactttcactaaagatgagcaattctatcaagatcgtaaa
aagtcatatattaagaagaaaaaagaaagtgatggatacacattaggtaggaaagttaag
cataatcgttttggtgaaggtaccattgttaatttagatggcgaaggtgaacatagacga
gtgcaaattgcttttgttaatgaaggggttaaatggctagttgtgaaactggcaaatctt
accttaatgtaa
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