Gilliamella apis: RAM11_07240
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Entry
RAM11_07240 CDS
T09380
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gaq
Gilliamella apis
Brite
KEGG Orthology (KO) [BR:
gaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaq03016
]
RAM11_07240 (rnd)
Enzymes [BR:
gaq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RAM11_07240 (rnd)
Transfer RNA biogenesis [BR:
gaq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RAM11_07240 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
RHH_9
Motif
Other DBs
NCBI-ProteinID:
WLT05657
LinkDB
All DBs
Position
complement(1587548..1588636)
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AA seq
362 aa
AA seq
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MNYQFIISNDELSNYCQKIKNSSAIALDTEFVRTRTFYPHLGLLQVFDGKHAALIDPLNI
NDWQELLVILTNPKIEKYFHSCSEDIEVFLHTFNCVPSPVIDSQILASFLDNPISSGYAS
LVNKYLGVELDKSETRTDWLKRPLTEKQCDYAINDVLYLFPLMNSLKSQLISIDYLAAAY
QECQNAIARKCETFDPQKAYLNIKNSWQLKGDSLGQLAKLACWRYQFAKTHDIALNFVVH
EEILWKIARYQPTSLAELDKLGMKGKDIRSYGQTILDILLQPIPIIPAIQRINSYPNYKN
IADSLKQIAEKIASKTGLNSELILSRRLINQYVKWQNDRKGEIPEILSGWRKPLFEQYDL
PN
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcaatttattattagtaatgatgaattatccaattattgtcaaaagatcaag
aatagtagtgctatagcattggatactgaatttgtacgaactaggactttttatcctcat
ttagggctgttacaggtttttgatggtaaacatgccgccttaattgatccgcttaatatt
aacgattggcaggaattattagtgattttaaccaatcctaaaattgaaaaatattttcat
tcctgcagcgaagatattgaagtgtttctacatacatttaattgtgttccttctccagta
attgatagccaaattttagcttcttttttggataatccaattagtagtggttatgcaagt
ttagttaataaatatcttggcgttgagttagataaaagcgaaacacgaactgattggtta
aaacgccctttgacagaaaaacagtgtgattatgctattaatgatgttttatatctgttt
ccattaatgaatagtttaaaatctcagcttatatcgattgattatttagcggctgcttat
caagagtgtcaaaatgcaattgcacgtaaatgtgaaacatttgatcctcaaaaggcttac
ttaaatattaaaaatagctggcaattgaaaggggatagtttagggcaattagctaaactt
gcttgctggcgttatcaatttgccaaaactcacgatatagcgttgaattttgtggtacat
gaagagattttatggaaaatagctcgttatcaaccaacttctttagctgaactggataaa
ttgggtatgaaaggtaaagatatccgttcatatggccaaacaattttggatatattgctt
caacctatacctattattccggcaattcaacgtattaatagttatccaaattataaaaat
attgctgattcattgaaacaaatcgctgaaaaaatagcatcaaaaacaggacttaacagc
gaattaatactttcaagacgattaatcaatcagtatgtaaaatggcaaaatgataggaaa
ggtgagattcctgaaattctgtcaggatggcgtaaaccattatttgaacaatatgaccta
cctaattga
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