Gilliamella apis: RAM11_10135
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Entry
RAM11_10135 CDS
T09380
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gaq
Gilliamella apis
Pathway
gaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RAM11_10135 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaq03019
]
RAM11_10135 (pnp)
03016 Transfer RNA biogenesis [BR:
gaq03016
]
RAM11_10135 (pnp)
Enzymes [BR:
gaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RAM11_10135 (pnp)
Messenger RNA biogenesis [BR:
gaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RAM11_10135 (pnp)
Transfer RNA biogenesis [BR:
gaq03016
]
Prokaryotic type
tRNA degradation factors
RAM11_10135 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
S1_2
KH-I_KHDC4-BBP
S1_RRP5
aRib
DUF3016
DUF5813
Motif
Other DBs
NCBI-ProteinID:
WLT07718
LinkDB
All DBs
Position
complement(2235007..2237127)
Genome browser
AA seq
706 aa
AA seq
DB search
MILFNPTYQKFQYGRHTVTLETGIMARQATAAVMVNMDDTAVFVTVVANKKVKEGQDFFP
LTVNYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPLRPLFPEGFVNEIQIIATVV
SVNPEVSPDLVAMIGASAALCLSGVPFHGPIGAARVGFINDEFVLNPSVKELATSRLDLV
VAGTKSAVLMVESEADLLTEDQMLAAVVFGHDQQQVVIDNINEFVAKANCEKWDWVAPAK
NEALFNAVSELAKDRLGEAYRITEKQARYAQIDLIKEEVLAALKEKDEELDENEVINIIV
DLESQIVRQRVIAGEPRIDGREKDMIRALDIRTNVLPRTHGSALFTRGETQALVTATLGT
ERDAQIIDELTGEYTERFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVAAVMPSK
EEFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSSVAGIAMGLVKEGDNFVVL
SDILGDEDHLGDMDFKVAGTREGVSALQMDIKIEGITKEIMQVALNQAKGARLHILGVME
QAINKPRQEISEFAPRIYTMNVNPDKIRDIIGKGGATIRALTEETGTTIEIADDGTVKIA
ASDGNKAQDAIARINNLVADVEIGKIYTGKVTRIVDFGAFVSVIGGKEGLVHVSQIADHR
VEKVADYLKVGQEVNVKVLEIDRQGRIRLSMKDAVESTPEVTPTAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
attattttgtttaatccgacatatcaaaaattccaatatggtcgccatactgttacttta
gaaactggtattatggcgcgtcaagcaactgctgctgttatggttaacatggacgatact
gcggtatttgtcactgtagttgctaataaaaaagttaaagaaggacaagactttttccct
ttaaccgttaactatcaagaacgtacttatgctgctggtcgtattcctggtggctttttc
aaacgcgaaggtcgcccaagtgaaggcgaaacattaattgcccgtttaatcgaccgtcca
cttcgtccattatttcctgaaggttttgttaatgaaattcaaattattgcaacagtggta
tcagtgaatcctgaagtaagccctgatttagttgctatgattggtgcatcagctgcactt
tgtttatctggcgttcctttccatggcccaattggtgctgctcgtgtaggctttatcaat
gatgaatttgtgttaaatccatcagtaaaagaattagcaactagtcgtttagatttagtt
gtagcaggtaccaaaagtgctgtattaatggttgaatcagaagctgatttattaactgaa
gaccaaatgttagcggcagtggtatttgggcatgatcaacaacaagttgtaattgataat
atcaatgaatttgttgctaaagcgaattgtgaaaaatgggattgggttgcaccagctaaa
aatgaagcgctatttaatgcggtttctgaattagctaaagatcgtttaggtgaagcctat
cgtattactgaaaaacaagctcgttatgcgcaaatcgatttaattaaagaagaagtgtta
gctgcacttaaagaaaaagatgaagagcttgacgaaaacgaagttattaacattattgtt
gatttagaaagccaaatcgttcgtcaacgtgttattgctggtgaaccacgtatcgatggt
cgtgaaaaagatatgattcgtgctctggatattcgtaccaatgtattaccaagaactcat
ggtagcgcattatttactcgtggcgaaacgcaagcattagttaccgcaactttaggtact
gaacgtgatgcacagatcattgatgagttaactggtgaatataccgaacgtttcctttta
cattataacttccctccatattcagttggtgaaacaggtatggttggttcaccaaaacgt
cgtgaaattggtcatggtcgtttagcaaaacgtggtgttgctgcggtaatgccaagcaaa
gaagaatttccatatactgtacgtgtagtttctgaaattactgaatctaatggatcttct
tcaatggcttcagtttgtggcgcatcattggcattaatggatgctggtgttccaattaag
tcttctgttgctggtattgcaatgggccttgttaaagagggtgataactttgtagtttta
tctgatattttaggtgatgaagaccatcttggtgatatggactttaaagtagctggtacc
cgtgaaggtgtaagtgcactacaaatggatatcaaaattgaaggtatcactaaagaaatt
atgcaagttgcattaaaccaagctaaaggggcgcgtttgcatattttaggggtaatggaa
caagcgattaataaacctcgtcaagagatatctgaatttgctcctcgtatctatacgatg
aatgttaatccagataaaattcgtgatatcatcggtaaaggcggtgcaacgattcgtgca
ttaaccgaggaaactggtactactattgaaattgcagatgatggtacagtgaaaattgcg
gcatctgatggtaataaagcacaagatgcaatcgcacgtatcaataatttagttgctgat
gttgaaattggtaaaatctataccggtaaagtaacacgtattgttgattttggtgctttc
gtttcagttattggtggaaaagaaggacttgttcacgtttcacaaatcgctgatcatcga
gtggaaaaagttgctgactacttaaaagtaggtcaagaagtgaatgttaaagtactagaa
attgatcgccaaggtcgaattcgtttaagtatgaaagatgcagttgagtctacaccagaa
gttacgccaactgctgaataa
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