Gilliamella apis: RAM11_10615
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Entry
RAM11_10615 CDS
T09380
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
gaq
Gilliamella apis
Pathway
gaq02020
Two-component system
gaq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gaq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RAM11_10615
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RAM11_10615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaq03021
]
RAM11_10615
Transcription machinery [BR:
gaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAM11_10615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
OGG_N
Motif
Other DBs
NCBI-ProteinID:
WLT07720
LinkDB
All DBs
Position
complement(2343056..2344471)
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AA seq
471 aa
AA seq
DB search
MKQGLQLKVSQQLSMTPQLQLAIRLLQLSTLELRQEIQTVLENNPLLEIADQYDEINVEQ
DELNENIDTREALDSQEIPEDIPLDASLDDIYTAGTPSGTHSDYRNDELPIYQGETHETL
HDYLKWQLDLTPFSDIDRAIAVSIIEAIDDRGYLTVSTEEILEEQGNSQIELDEVEAVLK
RIWHFDPIGVGARSLQECLSIQTQHLTPPVLVKQIIDNYLDLLANHDYRTLKKRLNATDE
QLKEAINFIQHLQPYPGDSVNTLPPDYVIPDLVVKKIDGKWIAELNSDTVPTLRINQQYA
AMEKISNESDSQYIRAHLQDANWFIKSVENRNETLLKVSQFIVEHQQEFFENGAEYMKPM
ILSDVAMAIDMHESTISRVTTQKYLQCPNGIFELKFFFSSHVNTESGGEASSTAIRALIK
KYISEEDAKKPLSDSKLVSILENQGIIIARRTVAKYRESLSIPPSNQRKQL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaggcttacaactgaaggtttcgcaacagttgtcaatgacgccacaattacaa
ttagctattcgattgttgcaattgtcgactttagaattacgtcaagaaattcaaactgta
ctcgaaaacaatccattattagagattgccgatcagtatgatgaaattaatgttgaacaa
gatgaactaaacgaaaatattgatactcgtgaagcattagatagccaagaaatccccgag
gatattccattagatgcctcattagatgatatttacacagctggtactccctcaggaact
cactcagattatcgtaatgatgagttaccaatctatcaaggtgaaacacatgaaacattg
catgattacttaaaatggcaattagatttaacaccatttagtgacattgatcgtgcaatt
gctgtttcgattattgaagctattgatgatagaggttatctaacagtttcaactgaagaa
attctagaagaacaaggcaatagtcaaattgaacttgatgaggttgaggcagttttaaag
cgaatttggcattttgatccaatcggtgttggagcgagatctttacaagaatgtctatct
attcaaactcagcatttaactccgccagtattagttaaacagattattgataactattta
gatttattagcaaatcatgattatcgaacattgaaaaaacgcttaaatgctacggacgaa
cagttaaaagaagccattaattttatccagcatttacaaccttatcctggtgattcggtc
aataccttacctccggattatgttattcctgaccttgtggttaaaaagattgatgggaaa
tggattgctgaattaaatagcgatactgttccgactctgcgtattaatcaacaatatgcg
gcaatggaaaaaattagtaatgaaagtgatagccaatatattcgcgcacatttgcaagat
gcaaattggtttattaaaagtgtcgaaaatcgtaatgagacactattaaaagtaagtcaa
tttattgttgagcaccaacaagaattttttgaaaatggtgctgaatatatgaaaccaatg
attttgtcagatgttgctatggcgattgatatgcatgaatcaacaatttcacgcgtgacg
acgcaaaaatatttacaatgccctaatggtatatttgagttgaaattcttcttttctagt
catgttaatactgaatctggtggtgaagcatcatcgacagcaattcgggctttaattaaa
aaatatatttctgaagaagatgctaaaaaacctttaagtgatagtaaactagtttcaatt
ttagaaaatcaaggaattattattgctcgtcgaacggttgctaaatatcgtgaatcttta
tcgataccaccgtcaaatcaacgaaaacagctttga
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