Gilliamella apis: RAM11_11395
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Entry
RAM11_11395 CDS
T09380
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gaq
Gilliamella apis
Pathway
gaq03030
DNA replication
gaq03430
Mismatch repair
gaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAM11_11395 (holB)
03430 Mismatch repair
RAM11_11395 (holB)
03440 Homologous recombination
RAM11_11395 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaq03032
]
RAM11_11395 (holB)
03400 DNA repair and recombination proteins [BR:
gaq03400
]
RAM11_11395 (holB)
Enzymes [BR:
gaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAM11_11395 (holB)
DNA replication proteins [BR:
gaq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RAM11_11395 (holB)
DNA repair and recombination proteins [BR:
gaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RAM11_11395 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
LUC7
DUF6788
Motif
Other DBs
NCBI-ProteinID:
WLT06443
LinkDB
All DBs
Position
complement(2517077..2518075)
Genome browser
AA seq
332 aa
AA seq
DB search
MIFNKYPWLALPFQQLADTIVNNRAHHAMLINYIQGSGEEELINLLVNRLICQSSQQLEP
CGNCHNCQLFLSQHHPDYYVITHEQGKQSIGIDQIRSISTKVYEKSQQGGNKIIWIKHAA
SMTEAAANALLKTLEEPPENTYFILSDEHNSQFLPTIHSRCFCYFLPIPKLEQSIDWLKK
QHNHLYSDNELATALLLSENAPINAATLLQPEKWQQRKSFCENLLEILPQNNFWQLAKTF
NHEVFFEHITWFCALLSDALKAKQKVGRYIVNRDQVPLVRLLATKNNDEIALLYQIWLQA
RNLLLSVTGLNKELIICNVLAQSQLIGYQQQN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgatttttaataaatatccttggcttgcattaccttttcagcaacttgctgatacgatt
gttaataatcgggctcatcatgccatgttaattaattatattcagggaagtggtgaagaa
gaattgataaatctactggttaatcgattaatttgtcaatcttcacaacaattagagcct
tgtggtaattgtcataattgccagttgtttttatctcagcatcatcctgattattacgta
attacacatgagcaaggtaaacaatcaattggtattgatcaaatacgtagtatttcgact
aaagtttatgaaaaatcacagcaaggtggcaataaaataatttggatcaaacatgcggct
tcaatgacggaagctgcagctaatgcattgctaaaaacattagaagagcctccagaaaat
acctattttattttgagtgatgagcataatagccaatttttacccacaattcacagtcgt
tgtttttgttattttttacctattccaaaattagaacaatctattgattggttaaaaaaa
caacacaatcacctatacagcgataatgagcttgccactgcattattattgagcgaaaat
gcgccaataaatgcagcaacattacttcaacctgaaaaatggcagcagagaaaatcattt
tgtgaaaatttattagaaatcttaccgcaaaataatttttggcaattagcaaaaactttt
aatcatgaagttttttttgagcacattacttggttttgtgcattgttaagcgatgcctta
aaagccaaacaaaaagtaggtcgatacatagttaatcgcgatcaagtgcctttagtcagg
ctacttgcgacaaagaataatgatgaaatagctttgttgtatcaaatttggttacaagcg
aggaatttattgttatcggtcactggattaaataaggaattgattatttgtaatgtttta
gctcaatcacaactaattggctatcagcagcagaattaa
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