Gilliamella apis: RAM11_11805
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Entry
RAM11_11805 CDS
T09380
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gaq
Gilliamella apis
Pathway
gaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RAM11_11805 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaq03021
]
RAM11_11805 (rho)
03019 Messenger RNA biogenesis [BR:
gaq03019
]
RAM11_11805 (rho)
Transcription machinery [BR:
gaq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RAM11_11805 (rho)
Messenger RNA biogenesis [BR:
gaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RAM11_11805 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA_25
AAA
FtsK_SpoIIIE
S1CSD-TOTE-2
Shikimate_DH
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
WLT06517
LinkDB
All DBs
Position
complement(2606073..2607335)
Genome browser
AA seq
420 aa
AA seq
DB search
MNLTELKNTSVAELVALGEKKMGLENLARLRKQDIIFAILKQHAKSGEDIFGDGVLEILQ
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKEGERYFALLKVNEV
NHDKPEDARNKILFENLTPLHPNSRLRMERGNGSTEDITARVLDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSLAVNHPECELVVLMIDERPEEVTEMQRLVKGEVVASTFDEPAARH
VQVAEMVIERAKRLVEHKKDVIILLDSITRLARAYNTVIPSSGKVLTGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMEVHLSRKIAERRVFPAID
FNRSGTRKEDLMTSPDELQKMWILRKILNPMGEIDAMEFLIDKLAMTKTNDEFFEMMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaactgaattaaaaaacacatctgttgccgagcttgtagcgcttggtgagaaa
aaaatggggcttgaaaatcttgcccgtcttagaaaacaagatattatctttgcaatctta
aaacagcatgctaaaagtggtgaagatatttttggcgacggtgttctagagattttgcaa
gatggttttggctttttgcgttctgctgatagttcttatttagcagggcctgatgatata
tatgtttcaccaagtcaaattaggcgctttaatttaagaactggcgatactatagccggt
aaaattagaccgccaaaagaaggcgagcgttattttgctttattaaaagtaaatgaagtt
aaccacgataaacctgaagatgctcgcaataagatcctttttgaaaacttaactcctcta
catccaaattctcgcttacgtatggaacgtggcaatggctcaaccgaagatattactgca
agagtacttgatttagcctctccaatcggtaaaggtcaacgtggtttgattgttgcgcca
cctaaagcgggtaaaaccatgttactacaaaacattgctcaaagtttagcggttaatcac
cctgagtgtgaattagtcgtattgatgatcgatgagcgaccagaagaagtgactgaaatg
caacgcctagttaaaggtgaggttgtggcttcaacgtttgatgaaccagcggcaagacat
gttcaagttgccgaaatggtaatagaacgtgcaaaacgtttggttgagcacaaaaaagat
gtcattattttattagactcaattactcgtttagctcgtgcatacaatactgttattcca
tcatcaggcaaagtattaactggtggtgttgatgctaatgccttacatcgtcctaagcgc
tttttcggtgctgcacgtaatgtggaagaaggtggtagtttaaccattatagcaacggct
ctaattgatacaggttctaaaatggatgaagttatttacgaagaatttaaaggtactggt
aatatggaagtacatttatcgcgtaaaattgctgaacgccgtgtatttcctgctattgac
tttaatcgctcaggtactcgtaaagaagatttaatgacttctccagacgaattacaaaaa
atgtggattttacgtaaaatcctcaatccaatgggcgaaattgacgcaatggagttctta
atcgataaacttgccatgactaaaaccaatgatgagttttttgaaatgatgaaacgctca
taa
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