Gilliamella apis: RAM11_11815
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Entry
RAM11_11815 CDS
T09380
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
gaq
Gilliamella apis
Pathway
gaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RAM11_11815 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaq03019
]
RAM11_11815 (rhlB)
Enzymes [BR:
gaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RAM11_11815 (rhlB)
Messenger RNA biogenesis [BR:
gaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RAM11_11815 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
WLT06519
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All DBs
Position
2608141..2609367
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AA seq
408 aa
AA seq
DB search
MIQSYLTKTTFNQFPLHPLVIKALEKKGFVYCTPIQEQTLPLTSKGIDIAGQGQTGTGKT
IAFLASTFNHLLNNDPLADHKPNQPRAIIIAPTRELVVQIYHDAQTLSEQTGLKLGLAYG
GDGYDKQLKMLSAGVDILIATTGRLIDYAKQDYINLEAIQVAVLDEADRMFDLGFIRDIR
WIFKHMTSPKKRLTMLFSATLTHNVRELAFEYMNEPQYIEVEPEQKIGHRIKEELFFPSN
EDKLALLQTLIEEEWPDRCIVFANTKVACEKIWRHLVADGHRVGLLTGDIAQKKRLSILD
KFTQGDLDILVATDVAARGLHIPNVTHVFNYDLPDDCDDYRHRIGRTGRAGAEGYSISLA
CERYSQNLPAIEKAIDHAIPVSQYDPQALLTDLPTPRPFKRTTRRKPS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgattcaatcatatcttacaaaaacaactttcaatcaatttcccctgcatccattagtt
ataaaagcattggagaaaaaaggtttcgtttactgtaccccaattcaagaacaaacatta
ccattaacctcaaaaggaattgacattgcaggacaaggacaaactggtacgggtaaaacg
attgcgtttttggcttcaacatttaatcatttattgaataatgatccattagccgatcat
aagccgaatcagccacgagctatcattattgcaccaacacgtgaattagtggtacaaatt
tatcatgatgcacaaacgctttcagaacaaactggcctcaaattaggtttagcttatgga
ggtgatggttatgataaacaattaaaaatgttgtctgctggtgttgatatattaattgct
accactggtcgactaattgattatgcaaaacaagattatattaacttagaggcaattcag
gttgccgttcttgatgaagcagatcgtatgtttgatttaggttttatccgtgatattcgt
tggatatttaaacatatgacatcgcctaaaaaacgcctcactatgttattttctgcaact
ttaactcataatgttcgtgagcttgcttttgaatatatgaatgaaccacaatatattgaa
gttgaacctgaacaaaaaattggtcatagaattaaagaagaactatttttcccatcaaat
gaggataaattagctttactacaaactttaattgaagaagaatggccagatcgctgtatt
gtatttgcaaatactaaagttgcttgtgagaaaatttggcgccatttagtggctgacggt
catcgtgtcggcttattgacgggtgatatagcacaaaaaaaacgtttatctattcttgat
aaattcactcaaggtgatcttgatatattagttgcaacggatgttgctgcacgaggttta
catattccaaatgtaactcacgtttttaattatgatctgcctgatgattgtgatgattat
cgacatcgaattggtcgtactggccgtgctggagctgaaggttattcaatttcattagct
tgtgagcgttactctcaaaacctaccagctattgaaaaagcaattgatcacgctattccg
gttagtcaatatgatcctcaagcattacttacagatctaccgacaccaagacctttcaaa
agaacaactcgtagaaagccatcataa
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