Glutamicibacter halophytocola: AOZ07_00845
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Entry
AOZ07_00845 CDS
T04229
Name
(GenBank) Fis family transcriptional regulator
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
gar
Glutamicibacter halophytocola
Brite
KEGG Orthology (KO) [BR:
gar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gar03016
]
AOZ07_00845
Enzymes [BR:
gar01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
AOZ07_00845
Transfer RNA biogenesis [BR:
gar03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
AOZ07_00845
Prokaryotic type
tRNA splicing ligases
AOZ07_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Hexapep
Motif
Other DBs
NCBI-ProteinID:
ALG27689
LinkDB
All DBs
Position
181972..183171
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AA seq
399 aa
AA seq
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MNRPAAFPVALTGSNDRVKMWAAEAEVEHEALEQLRRVAQLPWVHGVRVMPDVHVGKGAT
IGSVIAMNQAVSPSAVGVDIGCGVAAVRTSIRADQLAGLELLRASIEAAIPVGFNAHEEL
PQLRRFGLEPGVDQLFGRFETLDEKVQKLKSKAIGQLGTLGGGNHFLELCLDQDDRVWIT
LHSGSRNIGKTLADRHIGIAKSLGHNQGLVDKELAVFIEGTPQMDAYKHDLWWAQEYAAA
SRALMLALFKEAVVRHFETLDVRFDAPINVHHNYVNEEMIDGQALLVTRKGAIRAGAGDL
ALIPGSMGTGSYVVRGRGNPGSYFSASHGAGRRMSRTAAKKMYSADDLAAQTVGIECRKD
AGVVDEIPAAYKDIHQVIEAQKDLVEVVGHLRTILCVKG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtccagcagcgttccccgtagcgctgaccggcagcaatgaccgcgtaaaaatg
tgggccgcagaagccgaagtggaacacgaagcacttgagcagctgcgccgcgtggctcag
ctgccatgggtccacggcgtacgcgtgatgcccgacgtccacgtcggcaagggggcgacg
atcggcagcgtcatcgccatgaaccaggccgtctcgccttcagcggtgggcgttgacatc
ggctgcggcgtcgccgccgtgcgcaccagcatccgtgccgaccagttggctggcttggag
ctgctgcgagccagtatcgaagctgcgatccccgtgggattcaacgctcacgaggagctg
ccccagttgcgccgtttcggcctggaacccggggtggatcagctcttcggcaggttcgaa
accctggatgagaaggtgcagaagctcaagagcaaggccatcggccagctggggaccctg
ggaggtggcaaccacttcctggagctgtgcctcgatcaggatgatcgggtgtggattacc
ctgcattccggttcgcgcaatatcggcaagaccctggctgacaggcacatcggcatcgcg
aagtcgctggggcacaaccagggcttggtcgacaaggaactggctgtcttcatcgagggc
acaccgcagatggatgcctataagcacgatctgtggtgggcgcaggagtacgcggccgcg
tcgcgggccctgatgctcgcgctgttcaaggaggccgtagtccggcacttcgaaaccctt
gatgtccggtttgatgcgccgatcaacgtccaccacaactacgtgaacgaggagatgatc
gatgggcaggcgctgctggtgacgcgcaagggcgctatccgtgctggtgccggagatctc
gccctgatacctgggtccatgggcactggatcctatgttgtgcgtgggcgcggcaaccca
gggtcgtacttctcggcctcccacggtgccgggcgtcggatgagtaggacggcggcgaag
aagatgtactcggccgatgacctcgccgcgcagactgtaggcatcgagtgccgcaaggat
gcgggggtcgtggatgagatccccgcggcctacaaggacatccaccaggtgattgaagca
cagaaggatctggtggaagtcgtcggccacctgcgcaccatcctgtgcgtcaaggggtag
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