Glutamicibacter halophytocola: AOZ07_03400
Help
Entry
AOZ07_03400 CDS
T04229
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gar
Glutamicibacter halophytocola
Pathway
gar03420
Nucleotide excision repair
gar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOZ07_03400
03430 Mismatch repair
AOZ07_03400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gar03400
]
AOZ07_03400
Enzymes [BR:
gar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOZ07_03400
DNA repair and recombination proteins [BR:
gar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOZ07_03400
MMR (mismatch excision repair)
Other MMR factors
AOZ07_03400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
AAA_30
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALG28134
LinkDB
All DBs
Position
706706..709084
Genome browser
AA seq
792 aa
AA seq
DB search
MDFLFDDFATDTTPQVMPSAEDLLQGMNPQQEEAVRYAGGPLLIVAGAGSGKTRVLTHRI
AYLLATGRARPHEILAITFTNKAAAEMRERAAELIGEEQAKKMWISTFHSSCVRILRREA
ATIGLKSNFSIYDSTDSLRLITLVAKSLEIDPKRFTPKAIAHKISSLKNELIDDEDYAST
INTNDPFSRAVAEVYRGYTRRMRSANALDFDDLIGQVVFMFRAFPRVADKYRRRFRHVLI
DEYQDTNHAQYSLIRELTGIEGETTPGELTVVGDSDQSIYAFRGADIRNIIEFEKDYPNA
ATIKLEQNYRSTQTILSAANEVIKRNPDRNDKRLWTASGDGEQITGYVGESESDEARWIA
EEILRLNDENDVRPGDVAIFYRTNAQSRALEEQLMRVDLKYRVVGGTRFYDRKEIKDALA
YLRVLVNPEDDINVRRILNEPKRGIGDRAEGAVAALADRERISFMEALRRSDEAPGLGTR
GIKMTAAFVSLIDDLQTVAEGSGPAEALEAVLEQTGYLENLRLSTDPQDESRVENLAELV
AVVRDFVNEDPEGGLAGFLERVALVADADQIPEAPSDDEGAAMAAQEGMVTLMTLHTAKG
LEFPVVFLTGMEHGVFPHQRSMTDEKELAEERRLAYVGLTRARERLYLTRAEQRSLWGQA
QYNPASQFLEEVPSELIDWKREGSGGGMGFGFGNAAVNFATSRYERGSHWGAGTSGSTPQ
RGHNAAPVSKQRVVQNKDITVPKVGQSVKHSAFGLGTVIALEGAGDKTVAKVQFPDSEKR
LLLRYAPLEIVE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggattttctttttgatgatttcgccaccgacaccacaccgcaggtaatgcccagtgca
gaagacctactgcagggcatgaatccgcagcaggaagaagccgtccgctacgccggcggc
cccttgctgatcgtggcaggagccggatcggggaaaacccgtgttctcacgcaccgtatt
gcctatctattggccacgggtcgtgcgcgcccccatgagatcctggcaattaccttcacc
aacaaggccgccgcagaaatgcgcgagcgagctgcggagctgatcggggaagagcaagca
aaaaaaatgtggatctcaaccttccactcttcgtgcgttcgcatccttcgtcgtgaagcc
gcaaccattggccttaaatcgaacttttccatctatgattcaaccgattccctccggttg
atcaccctggtggccaagtccttggaaatcgacccgaagcgattcactcccaaggccata
gcgcacaaaatttcctcgttgaagaacgaactcatcgacgacgaagattatgcatcgacc
attaacaccaacgacccgttttctcgggccgtcgccgaggtctaccgcggctacacccgg
cggatgcgttcggccaatgcgctcgatttcgatgacctaatcggccaggtggtcttcatg
ttcagggccttcccaagggtcgccgacaaataccggcgtcgattccgccacgtgctgatc
gacgaataccaagatacaaaccacgcccagtattcgctgatccgcgagctgaccggcatc
gaaggggagacgacacctggtgagctgacggtagttggtgactctgaccagtccatttac
gcattccgtggcgcagatatccgcaacatcatcgaatttgaaaaagactatcccaacgcg
gcgacgattaagctggagcaaaattaccgctctacgcagacgatcctctccgcggccaac
gaagtcatcaagcgcaatccggaccgcaacgacaagcggctgtggactgcgagcggcgac
ggcgaacagatcacgggatacgtcggcgaatcggaatccgacgaggcacggtggattgct
gaggagatcctgcggctcaacgacgaaaacgacgttcgccccggcgacgtggcgatcttc
taccgcaccaacgcccaatcgcgcgcgttggaggaacaactgatgcgcgttgacctcaaa
taccgcgttgttggcggaacaaggttctacgaccgcaaggaaatcaaggatgcgctggcc
tacctgcgcgttttggtgaacccggaggacgacattaacgtccggcgtatcctcaacgag
ccgaagcgtggcatcggggatcgcgctgaaggcgccgttgcagcgctggcggaccgggaa
cgcatttcctttatggaggccctgcgccgttcggatgaagctcctggcttggggacccgc
ggcatcaagatgaccgctgcatttgtttcgctgatcgatgacctgcaaaccgttgccgaa
ggatccggcccggctgaagcgctcgaagcggtgctggaacagaccggctacctggagaac
ctgcggttgtcgacagacccccaggatgaatcccgggtcgagaacttggccgagctggtc
gccgtggttcgggacttcgtcaatgaagatcctgaaggcggactggctggattcctggaa
cgtgtggctctggtcgccgacgctgatcagattcccgaggctccgagcgatgacgaaggc
gctgccatggccgcgcaagaaggcatggtcacgttgatgaccctgcatacagccaagggc
ttggaattccctgtcgtattcctgaccggtatggagcacggtgtattcccgcatcagcgt
tcgatgaccgatgaaaaggaactggcagaagagcgccgcctggcctatgtggggctgacc
cgtgcccgcgaacgcctgtacctgacccgcgcagaacagcgcagcctctgggggcaggcc
cagtacaaccctgcgagccagttcctagaagaggttccgagcgagctgatcgactggaaa
cgtgaaggatctggcggcggaatgggcttcggctttggtaacgcagcggtgaatttcgcc
acgagcagatatgagcgtggaagtcactggggcgccggaacttctggcagcacgccacag
cgcgggcataacgcggccccagtatccaagcaacgcgtggtgcaaaataaggacatcacc
gttccgaaggtcggccaatcggtcaagcattccgcctttggcttgggaactgttattgct
ttggaaggtgccggcgacaagaccgtggccaaggtccagttccctgattctgaaaagcgt
ttgctgctgcgctacgcgccacttgaaatcgtcgagtag
DBGET
integrated database retrieval system
