Glutamicibacter halophytocola: AOZ07_09915
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Entry
AOZ07_09915 CDS
T04229
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
gar
Glutamicibacter halophytocola
Pathway
gar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOZ07_09915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gar03400
]
AOZ07_09915
DNA repair and recombination proteins [BR:
gar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOZ07_09915
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOZ07_09915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
AAA_15
AAA_23
nSTAND1
AAA_25
APS_kinase
AAA_22
AAA_16
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
Ataxin_7
Motif
Other DBs
NCBI-ProteinID:
ALG29268
UniProt:
A0AA95BQL6
LinkDB
All DBs
Position
complement(2161063..2163933)
Genome browser
AA seq
956 aa
AA seq
DB search
MAITAESKKTDLTRLVVKGAREHNLKNVDIDLPRDAMIVFTGLSGSGKSSLAFDTIFAEG
QRRYVESLSAYARMFLGQVDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYMR
LLWARVGRPHCPICHEPISKQTPQQIVDQLMELPEKTRFQILAPVVRARKGEFVDLFAEL
SSKGFSRARVDGTTIQLNDPPKLAKQVKHTIEVVVDRLAIKEDARQRLTDSIETALGIAD
GRVLADFVDLAEDDPKRVRAFSENLACPNEHPLAIDEIEPRTFSFNNPFGACSACSGIGT
KLEVDEHLIVPDPEVALADGAIAPWSLGKATTEYWNRLIEGLGHELGFTMETQWKDLSAK
AREAILNGKDHKVVVQYKNRFGRERKYSTGFEGVISYVHRKHEETESDHARDRYEQYMRQ
IPCPTCGGARLNPASLSVLIGGRSIAEVSAMDLRSAANFLSTIELSSREAKIAAQVLKEI
DARMKFLLDVGLEYLTLERAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRD
NRRLIDTLLHLRSLGNTLIVVEHDEDTIAEADWIVDIGPGAGEHGGEVVHSGSVEGLKAN
TKSLTGDYLSGRKKIDVPAKRRKVDKDRKLKVVGASENNLQDVSVEFPLGLLTAVTGVSG
SGKSTLVNDILYKVLANKLNGAKQVPGRHTRVLGLEHLDKVVHVDQSPIGRTPRSNPATY
TGVFDHIRKLFAETNEAKLRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCE
VCHGARYNRETLQVLYKGKNIADVLNMPIAEGAEFFSAFTPIARHLRTLVDVGLGYVRLG
QPATTLSGGEAQRVKLAAELQKRSNGRSIYVLDEPTTGLHFEDIRKLLKVLQGLVDKGNT
VLTIEHNLDVIKSADWVIDLGPEGGSGGGTILATGTPEKVAKVGESHTGRFLAEIL
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
gtggctattactgcagagagcaagaaaacagatctcactcgcctggtcgttaagggagcg
cgtgagcacaacctgaaaaatgtggacatcgatctgccccgcgacgcgatgatcgtcttc
accggactttccggatccggcaagtcctccctggcattcgacacgatcttcgctgaaggc
cagcggcgttacgttgagtcgctttctgcgtacgcccgcatgttcctcgggcaggtagac
aagccagatgttgacttcattgagggtttgtctccggcggtgtcgattgaccaaaagtcc
accagccggaatccccggtcaacagtaggcacgatcaccgaggtctacgactacatgcgt
ctgttgtgggctcgtgtcggacgcccgcattgccccatttgccatgagccgatctccaag
cagactccacagcaaatcgtggaccagctcatggagctgcccgaaaagactcgcttccag
attcttgcccccgtggttcgcgcacgaaagggcgagttcgtcgacctcttcgccgagctg
tcctcgaagggattctcgcgcgcccgcgttgatggcaccaccattcagttgaatgatccg
ccgaaattggccaagcaggtgaagcacaccattgaggtcgtcgttgaccgcttggccatc
aaggaagatgcacgccaacgcctgaccgattcgattgaaaccgcgctggggatcgccgac
ggccgcgtgctggccgactttgtcgaccttgccgaagatgacccgaaacgagttcgggca
ttctcggaaaacctggcttgccctaatgagcatccactggccatcgatgaaatcgagcca
cgcacattctccttcaacaatcctttcggcgcgtgctcggcatgctcgggcatcggcacc
aagctggaagttgacgagcacctgatcgtgcccgatccagaagtggccctagcagacggc
gcaatcgccccatggtcgttgggcaaggcaaccactgaatactggaatcgcctgatcgaa
ggcctgggccacgagctcggcttcaccatggagacccagtggaaggacctgtctgccaag
gcccgcgaagcgatccttaacggcaaagaccacaaggttgtggtccagtacaagaaccgc
tttggccgtgagcgcaagtactccaccggtttcgaaggggtcatctcctacgttcaccgc
aagcatgaagaaacagagtccgatcatgcccgtgatcgctacgaacagtacatgcgacag
attccttgcccgacgtgtggcggagcgcgcctgaatcctgcgtcgctgtcggtcctgatc
ggcgggcgttccatcgctgaagtgtcggctatggatttgcgcagtgccgccaacttcctg
tcgaccattgagctatcgtcccgcgaggcgaagatcgcagcccaggtgctgaaggaaatt
gacgcccgcatgaagttcctcttggatgtgggcctggaatacctcaccctggagcgcgct
gccggcaccctgtccggtggcgaggctcagcgcattcgcttggcaactcagatcggttcc
ggtctggtcggtgtcctgtatgtccttgacgaaccatctatcgggttgcatcagcgcgac
aaccgccgcttgatcgacaccttgctgcatctgcgctccttgggcaatacgctcatcgtt
gttgaacacgacgaagacaccatcgccgaagccgactggatcgtggatattgggccaggt
gccggtgagcacggtggcgaagtagtgcactcgggctcggtcgaaggattgaaggccaac
accaagtcgctgaccggagactacctctcggggcgcaagaagattgatgtcccagcgaag
cgccgcaaggttgataaggaccgcaagctcaaggtagtcggcgccagcgaaaacaacctg
caggatgtttccgtggaattcccgctgggcttgcttaccgcagtgactggcgtgtcgggt
tcgggcaaatccactttggtcaacgacatcctgtacaaggtgctggccaataagctcaat
ggcgccaagcaagtaccgggacggcatacccgggtgctcggccttgagcacctggacaaa
gtcgtacacgtggaccagtcgccgattggccgcactccgcggtccaatcctgctacgtac
acgggagttttcgaccacattcgcaagctctttgccgagaccaacgaagccaagctgcgc
ggctaccagccgggtcgattctcgttcaatgtcaagggcggacgttgcgaggcgtgctct
ggcgatggaacgctcaagatcgagatgaacttcctgcctgatgtctacgtgccgtgcgag
gtttgccatggtgcacgctacaaccgcgaaacattgcaggtgctttacaagggcaagaac
atcgcagatgtcttgaacatgccaattgccgagggagctgaattcttcagcgccttcacg
ccgatcgcacgccacctgcggaccttggtcgatgtcggattgggctatgtccgcttgggc
cagccggcgacgacgctatccggtggcgaagcccagcgcgttaaacttgccgctgaattg
cagaagcgctcgaacggccgttccatctacgtcctggatgagccaacgacaggtcttcat
tttgaggacatccgcaagcttctgaaggtcttgcaaggcctggtggacaagggcaacacc
gtcttgaccattgagcacaacctcgacgtgattaagtcggccgactgggtcattgatctt
ggtcctgaaggcggttccggcggtggcaccattctggcgactggaacgcctgaaaaggtc
gccaaggtcggcgaatcgcacaccgggaggttcttggccgaaatcctgtag
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