Entry |
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Name |
(GenBank) DNA polymerase I
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KO |
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Organism |
gar Glutamicibacter halophytocola
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:gar00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOZ07_10040
03410 Base excision repair
AOZ07_10040
03420 Nucleotide excision repair
AOZ07_10040
03440 Homologous recombination
AOZ07_10040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:gar03032]
AOZ07_10040
03400 DNA repair and recombination proteins [BR:gar03400]
AOZ07_10040
Enzymes [BR:gar01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOZ07_10040
DNA replication proteins [BR:gar03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AOZ07_10040
DNA repair and recombination proteins [BR:gar03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AOZ07_10040
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOZ07_10040
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(2189435..2192047)
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AA seq |
870 aa
MAFRAFYALPAENFATSTGQHTNAVHGFVSMLLTMIRQQKPTHVAVAFDLDTPTFRSLEY
TEYKGGRNKTPEEFYGQIDLIQEVMKAMNIPSITLESFEADDILATLATKGEDAGFDVLV
VSGDRDAFQLITEKTLVLYPKKGISDIPPMDAAAVEAKYFVRPERYSDLAALVGETADNL
PGVPGVGPKTAAKWINQYGDLAGILENIDAIKGKVGESLREHVDNVTRNRRLNQLKHDLD
LPVTLEEMELSAPNREEIENLFDALEFNTLRKRLFDLFAAQEEEVAPEVAAFTRVVTDNA
EGLRGFIDAGKGAPIALQPAVVDGEAVGLALYRGDQAAWLDLAQLDEAAEGVLAQFLADE
NAPKIFHDAKAAMHLLIERGLEVAGIRDDTLISAYLIQPDRRSHDLVDVVQYHLKYAVPV
HEAKKGELDLGLTSDLAEPALAQAQAIHDLSAYLATKLAEKHADVLAAEMELPLIPVLFE
MERAGVAVDVDRLNELRAHFTTQVDQATNDAFAAIGHEVNLSSPKQLQVVLFEELDLPRT
KKIKTGFTTDAESLQDLLVKTGHPFLVALMAYRDAIKLRQTVDGLLKATHGDGRIHTTYA
QTVAATGRLSSLNPNLQNIPVRSEEGRRIRDVFMVGEGYESLLTVDYSQIEMRIMAHLSE
DEGLIEAYQNGEDLHRYVGSRVFNVAPEEVTSEMRSKVKAMSYGLAYGLSSFGLSKQLKI
GVDEARKLMKDYFDRFGAVRTYLRSVVDQARKDGYTETIFGRRRYLPELNSSDRRLRDIA
ERAALNAPIQGSAADLVKVAMLKIAEGLAAGQFKSRMLLQVHDELILEVAAGELEQVQEL
VTREMGQAADLLVPLDVQPGIGRTWHDAAH |
NT seq |
2613 nt +upstreamnt +downstreamnt
atggcgttccgcgcgttctacgcgctgcccgcggagaacttcgcaacaagcaccggacag
cacaccaacgcggtgcacggattcgtgtcgatgctgctgacgatgatccggcagcagaag
cctacgcacgttgccgtggccttcgacttggataccccgaccttccgctcgttggagtac
accgaatacaagggtggccggaataagacccccgaagagttctacgggcagatcgacctc
atccaggaagtgatgaaggcgatgaatattccgtcgatcaccctggaaagcttcgaagct
gacgacatccttgccacgctggctaccaagggcgaagacgccggattcgatgtgctggtg
gtgtcaggagaccgagacgccttccagctgatcaccgaaaagaccctggtgctgtacccg
aagaagggcatcagcgacattccgccgatggacgccgccgccgtggaagcgaaatatttc
gttcgccccgaacgctactcggaccttgccgcgctggtaggcgaaaccgccgacaacctg
cccggcgtgccgggggttggcccgaagacggcagccaaatggatcaaccagtatggcgat
ctggccggcatcctggagaacattgatgcgatcaagggcaaggtgggcgagtcgctgcgc
gagcatgtggacaacgtgacgcgcaaccgccgcctgaaccagctcaagcacgatctggat
cttcccgtgaccctggaagagatggaactgtcggcgccgaaccgcgaagagatcgagaac
ctgttcgacgcgctggaattcaataccctgcgcaagcggctttttgacctcttcgctgcc
caggaagaagaggtcgcgccggaggttgcggccttcacccgggtggtcaccgacaatgcc
gaaggcctgcgtggcttcatcgacgccggcaagggtgcaccaatcgccctgcagccggcg
gtggttgatggggaagcagtggggcttgcgctctaccgcggtgaccaggccgcttggctg
gacttggctcagctggatgaagccgcagaaggcgtgctggcgcagttcctggccgatgag
aacgctccgaagatcttccacgacgccaaagcggccatgcacctgctgatcgaacgcggt
ctggaagttgccggcatccgggacgacacgctgattagcgcctacctgatccagccggat
cgccgaagccacgatctggtggatgtggtgcagtaccacctgaagtacgcggtgccggtg
catgaagcgaaaaagggcgaactggacctggggctcacctcggaccttgccgaaccggcc
ttggcccaggcgcaggcgattcatgacctctccgcctatctggccaccaagctggccgaa
aagcacgcggatgtgctggcggcggaaatggagctgccgctgattccggtgctcttcgag
atggaacgcgccggcgtggcagtggacgtggaccggctgaatgagttgcgcgcgcatttc
accacccaggtggatcaggcgaccaacgatgcgttcgccgcgatcggccacgaggtgaat
ctttcaagccccaagcagctgcaggtcgtattgttcgaggaactggatctgccgcgcacc
aagaagatcaagaccggcttcaccaccgatgccgaatcacttcaagatctcctggtcaaa
accgggcaccccttcctggtggcgctgatggcctaccgggatgcgatcaagctgcgccaa
accgtcgacggcttgctcaaggcaacccacggcgacggccgcatccacacgacctatgcg
cagaccgtggcggccaccggccggctttcgagcctgaacccgaacctgcagaacatcccg
gtgcgttcggaagaaggccggcggatccgcgacgtgttcatggtgggcgagggctacgag
agcctgctgaccgttgactactcgcagatcgaaatgcgcatcatggcgcacctgtccgaa
gacgagggcctgatcgaggcctaccagaacggcgaggacctgcaccgctacgtcggctcg
cgcgtgttcaacgtggcgccggaagaagtcacctcggaaatgcgttccaaggtgaaggcg
atgagctatggcttggcctatggcctgagcagctttggcctgtcgaagcagctgaagatc
ggtgttgacgaagcccgcaagctgatgaaggactacttcgaccgcttcggcgccgtgcgc
acctacctgcgctcggtggtggaccaggcgcgcaaggacggctacaccgagacgatcttc
ggacgccgccgctacctgccggagctgaacagctcggatcgccggcttcgcgatattgcc
gagcgtgccgcattgaacgccccgatccagggctctgcggcggatctggtcaaggtggcc
atgctcaagattgccgaggggctggctgcgggacagttcaagtcgcggatgctgttgcag
gtccatgacgaattgattctggaagttgccgccggtgaactggagcaggtgcaggaattg
gtgacccgcgaaatgggccaggccgcggacctgctggttccactggatgtccagccgggc
atcggccggacctggcacgacgccgcgcactag |