Glutamicibacter halophytocola: AOZ07_10305
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Entry
AOZ07_10305 CDS
T04229
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gar
Glutamicibacter halophytocola
Brite
KEGG Orthology (KO) [BR:
gar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gar03016
]
AOZ07_10305
Enzymes [BR:
gar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AOZ07_10305
Transfer RNA biogenesis [BR:
gar03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AOZ07_10305
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALG29329
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Position
2237108..2238358
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AA seq
416 aa
AA seq
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MPNSDSTASASSAAGLEPNQPALTPLTHPRDGIPEVINTQAALSRAVRELSAGTGDLAVD
TERASGFRYGQRAFLLQIRREGAGTWLIDPEVLDDLGELRSFVNQQPWILHAATQDLPCL
HELGMSPTALFDTELAGRLAGFPRVSLGTMVGELLGLQLAKEHSAVDWSTRPLPESWLNY
AALDVEVLEELRQEITKVLEEQGKMDFALQEFEYERNLPDPQPAEEPWRKLSGIHKLKGR
RNLAIARELWLSREALARTQDVAPGRLLPDRAIMAAIEQRAASVPALLQIPGFHTRNAKR
DAPRWMDAIQRGRNTRDLPELRSSKAGLPHPRSWAEKNPAAAARLDAAKAVLGEVGEHWN
IPAENLLTPKYLRDLCWNPPALISVETVAEKLDSMGARPWQQELLSAALAQSFASS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgccgaattctgactccaccgcttccgcatcatccgccgccggccttgagcccaatcaa
ccggcgctgaccccgctcacccatccacgtgatggcattcccgaggtcatcaatacccaa
gcggccctgtcccgcgcggtgcgcgaactgagcgctggaaccggcgatcttgctgttgat
accgagcgagccagcggtttccgctacgggcagcgcgctttcctgctgcagattcgccgc
gaaggcgccggcacctggctcatcgaccccgaggtattggatgacctgggcgagttgcgc
agctttgtgaaccagcagccatggattcttcacgccgcaacccaggatctgccctgcctc
catgaattgggcatgtcgcctaccgccttgttcgacaccgagttggcgggccgtctggct
ggtttcccccgggtctcccttggaacgatggtcggcgaattgctgggattgcagctggcc
aaggagcattcggcggtagattggtccacccgcccattgcccgagtcctggttgaactac
gccgcgctggacgtcgaggtcctcgaagagctgcgccaggaaatcaccaaggtcctcgaa
gagcagggcaagatggactttgccctccaggaattcgaatacgagcggaacctgcctgat
ccgcagccggccgaggaaccatggcgcaagctctccgggatccacaagctcaaggggcgg
cgcaacctggccatcgcccgcgagctgtggctctcgcgcgaagccctggctcgcacccag
gatgtcgcccccgggcggctgctgcccgatcgcgccatcatggcggccattgaacagcgg
gcggccagcgtcccggcactgctgcagatccccgggttccacaccagaaatgccaagcgc
gatgctccgcgatggatggatgcgattcagcgtgggcgcaatacccgcgatttgcccgaa
ctgcgctcgagcaaagccggcctgccccatccccggtcatgggcggagaagaacccggcg
gcagcggcccggctcgacgccgcgaaggccgtgctcggcgaagtgggcgaacactggaac
atcccggcggaaaatctgctgacgcccaaatacctgcgggatctgtgctggaacccgcca
gcgctgatcagcgtcgaaaccgtagctgaaaagctggattcgatgggcgcccggccatgg
cagcaagagctgctctcggcagctttggcccagtcgttcgccagcagctag
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