Glutamicibacter halophytocola: AOZ07_12145
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Entry
AOZ07_12145 CDS
T04229
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gar
Glutamicibacter halophytocola
Pathway
gar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOZ07_12145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gar03021
]
AOZ07_12145
03400 DNA repair and recombination proteins [BR:
gar03400
]
AOZ07_12145
Enzymes [BR:
gar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOZ07_12145
Transcription machinery [BR:
gar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOZ07_12145
DNA repair and recombination proteins [BR:
gar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOZ07_12145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ALG29660
LinkDB
All DBs
Position
complement(2636146..2640036)
Genome browser
AA seq
1296 aa
AA seq
DB search
MSSDSSFGLMRINLATAEEIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRANVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITGVDEARRHAEMPNLQAQHDLELRNLANNAEADKKAVAADLEAE
LERLEADGAKNAELNKARTLAEKTVLQIDKRAKAEAERLRAVWERFKGLKVADLEGDEGL
YRTMREKYGLYFEGSMGAEAIQKRLENFDLAGEAEELKTIIENGKGQKKARALKRLKVVN
AFLVNGNSPKGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMMQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKALQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSHNILKPSDGRPVALPSQDMIIGLHHLTTKRAHEIGAGR
VFSTISEAIMAKDRGELHLNAPIKVRVPNFVPSEEQPAPEGWEPGTDALLETSLGQVLFN
DTLPADYPWVARVAGKDALSEIVNDLAERYPKIVAAATLDNLKDAGFYWATRSGVTVAIS
DITSNMDKAAILAPYEERAAKVQASYDKGLIADTERRQDLIDIWTKATDEVAEAMKNGME
ELNTINRMVTSKARGNYLQLRQIAGIRGLVSNPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALKTANSGYLTRRLVDVSQDVIVREEDCGTKRGLTVAIADNSAGIRVKHET
VENSAYTRTLAADVKDAEGTVLATAGSDVGDVLIESLYNAGVDEIRVRSVLTCDSAVGTC
ALCYGRSLASGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRIQE
LFEARTPKGVAPMSEVTGRVSIEDDEKQLRVVVTPDNGDEKQAYPVLRRARLLVEEGQNI
VAGTQLTSGTLDPKQVLRVLGPREAQKFLVREVQDVYQSQGVGIHDKHVEVIVRQMLRRV
TVIESGETELLPGELADRSRFTAANRKAVTEGKRPAAGRDEMMGITKASLATDSWLSAAS
FQETTRVLTQAAMEGKEDPLRGLKENVIIGKLIPAGTGLDRYTQVNVEPTDEAKATLFTG
TSAFSSGLYDDALEGGLSPEFRAISMDDYDHGSDFR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgattcctcattcggcctcatgcgaatcaaccttgccaccgcggaagaaatc
cgtggatggagctacggcgaggtcaagaagccggaaaccattaactaccgcaccctgaag
ccggagaaggacggtcttttctgcgaaaagatcttcggcccttcccgcgactgggaatgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgttgtggcgtt
gaggtgacccgtgcgaacgttcgtcgtgagcgcatgggccacatcgagcttgcagctcca
gtgacccacatctggtacttcaagggcgttccatcgcgcttgggctacctgcttgatctg
gctccgaaggacctcgaaaaggtcatctacttcgctgcctacatgatcaccggtgttgac
gaggcacgtcgccacgccgaaatgcctaacctgcaggcccagcacgacctggaactgcgc
aacctggcgaacaacgcagaagctgacaagaaggctgttgcagccgacctggaagccgag
ctggagcgcctggaagcagatggcgccaagaacgccgaactgaacaaggcccgtaccctg
gccgagaagaccgttctgcagatcgacaagcgcgccaaggccgaggccgagcgcctgcgt
gcggtctgggagcgcttcaagggcctgaaggtcgccgacctcgaaggcgacgaaggcctg
taccgcaccatgcgcgagaagtacggactgtacttcgagggctccatgggtgcagaagcg
atccagaagcgccttgagaacttcgatctggccggcgaagctgaagagctgaagaccatc
atcgagaacggcaagggccagaagaaggcccgcgccctcaagcgccttaaggttgtcaat
gccttcctggtcaatggcaactcgcctaagggcatggtgcttgacgccgttccagtgatc
ccgccagaactgcgcccaatggtccagctcgacggtggccgtttcgccacctcggacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgcctgcttgatctc
ggtgcgccagagatcatcgtgaacaacgaaaagcgcatgatgcaggaagctgttgactcg
ctgttcgacaacggccgccgtggccgtccggtcaccggtccaggtaaccgcccgctgaag
tccctgagcgacatgctcaagggcaagcagggtcgtttccgccagaacctgctcggcaag
cgcgttgactactcgggccgttcggtcatcgtggttggcccgcagctgaagctgcaccag
tgcggcctgcctaagcagatggccctggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcacagaacatcaagtcggccaagcgcatggtcgagcgctaccgc
ccgcaggtctgggacgttctcgaagagatcatcaccgagcacccggtattgctcaaccgt
gcgccaaccctgcaccgcttgggcatccaggccttcgagccacagctggttgaaggcaag
gcccttcagctgcacccattggtttgcggcgccttcaacgccgacttcgacggtgaccag
atggcagtccacctgccgctgagcccagaagcccaggctgaagcccgcatcctgatgctg
tcctcgcacaacatcttgaagccttccgatggccgcccagtggcattgccttcgcaggat
atgatcatcggcttgcaccacttgaccaccaagcgtgctcatgagatcggcgccggccgc
gtgttctccacgatctccgaggccatcatggccaaggaccgtggcgagctgcacctgaac
gcaccgatcaaggtccgcgtgccgaacttcgttccttccgaggagcagcctgctcctgaa
ggctgggagccaggcaccgacgcattgctggagacctcgctgggccaggtgctgttcaac
gacaccctgccagcggactacccatgggttgcccgcgtcgccggcaaggatgcactctcg
gagatcgtcaacgatctggcagagcgctacccgaagatcgtcgccgcagctaccctggac
aacctgaaggatgccggtttctactgggccacccgctcgggcgtcaccgtggcaatctcg
gacatcacctcgaacatggacaaggcagccatccttgcgccatacgaggaacgcgccgcc
aaggtgcaggcttcctacgacaagggcctgattgcggataccgaacgccgccaggacctg
atcgacatctggaccaaggctaccgacgaggttgccgaggccatgaagaacggcatggaa
gagttgaacaccattaaccgaatggtgacttccaaggctcgtggtaactacctgcaattg
cgccagattgccggtattcgtggtctggtgtccaaccctaagggtgaaattattcctcgc
ccgatcaagtcttcctaccgtgaaggcctgtcggttctggagtacttcatcgcgacccac
ggtgcgcgtaagggcctggccgataccgcactgaagaccgcaaactcgggttacctgacc
cgtcgcctggtcgacgtgtcgcaggatgtcatcgttcgcgaagaggactgcggcaccaag
cgcggcttgaccgttgccattgcggataactccgcgggcattcgcgtcaagcacgaaacc
gttgagaactcggcttacacccgtaccctggccgccgacgtcaaggacgccgaaggcacc
gtactggcaaccgccggttccgatgtgggcgacgtgctgatcgagtcgctgtacaacgca
ggcgtggatgaaatccgcgttcgctccgtgctgacctgcgactcggctgttggaacctgt
gcactgtgctacggccgttcgctggccagcggcaagaccgtggacatcggcgaggctgtt
ggcattatcgccgcacagtccatcggcgagcctggtacccagctgaccatgcgtaccttc
cacaccggtggtgtggcatcggctgacgatatcacccagggtctgcctcgtatccaggaa
ctgttcgaagcccgtacccctaagggtgtggctccgatgtccgaggtcaccggtcgcgtg
tcgatcgaggacgacgagaagcagctgcgtgttgtggtcaccccggacaacggcgacgag
aagcaggcctacccggttctgcgtcgtgctcgcctgttggtcgaggaaggccagaacatt
gttgccggtacccagctcaccagcggtaccttggatccgaagcaggttcttcgagtcctc
ggcccacgtgaagcacagaagttcctggtccgcgaagtccaggatgtgtaccagtcccag
ggtgtaggcatccacgataagcacgtggaagtcatcgtccgccagatgctgcgtcgcgtc
accgtgatcgagtccggcgagaccgagttgctgccaggcgagttggccgaccgttcgcgc
ttcaccgctgcgaaccgcaaggctgtcaccgaaggcaagcgtccagctgccggtcgtgac
gagatgatgggtattaccaaggcatcgctggctacggactcgtggctgtcggctgcttcc
ttccaggaaaccactcgcgtcctgacccaggccgcgatggaaggcaaggaagatccgctg
cgcggcctgaaggagaacgtgatcatcggtaagctgatcccggccggcaccggtctggat
cgctacacccaggtcaacgtcgagccaaccgatgaggcaaaggcaactttgttcaccggc
acctcggccttctcctcgggtctgtacgacgatgcgctggaaggcgggctgtcgcctgaa
ttccgtgccatctcgatggacgactacgaccacggttcggacttccgctaa
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integrated database retrieval system
